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  5. GSVIVT01034162001

GSVIVT01034162001


Description : Cell wall.cell wall proteins.expansins.alpha-type expansin


Gene families : OG0000024 (Archaeplastida) Phylogenetic Tree(s): OG0000024_tree ,
OG_05_0000028 (LandPlants) Phylogenetic Tree(s): OG_05_0000028_tree ,
OG_06_0000041 (SeedPlants) Phylogenetic Tree(s): OG_06_0000041_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01034162001
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g16770.1 No alias alpha-class expansin 0.01 Archaeplastida
LOC_Os02g51040.1 No alias alpha-class expansin 0.02 Archaeplastida
MA_3618g0010 No alias Expansin-A15 OS=Arabidopsis thaliana... 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 165 242
IPR009009 RlpA-like_DPBB 67 153
No external refs found!