Description : Protein degradation.N-end rule pathway of targeted proteolysis.N-recognin-mediated ubiquitination.type-I-residues E3 ubiquitin ligase (PRT6)
Gene families : OG0002611 (Archaeplastida) Phylogenetic Tree(s): OG0002611_tree ,
OG_05_0004097 (LandPlants) Phylogenetic Tree(s): OG_05_0004097_tree ,
OG_06_0006106 (SeedPlants) Phylogenetic Tree(s): OG_06_0006106_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01034169001 | |
Cluster | HCCA: Cluster_220 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00012p00210330 | evm_27.TU.AmTr_v1... | Protein degradation.N-end rule pathway of targeted... | 0.02 | Archaeplastida | |
AT5G02310 | PRT6 | proteolysis 6 | 0.11 | Archaeplastida | |
Cre02.g089237 | No alias | Protein degradation.N-end rule pathway of targeted... | 0.02 | Archaeplastida | |
Gb_11947 | No alias | type-I-residues E3 ubiquitin ligase (PRT6) | 0.07 | Archaeplastida | |
LOC_Os01g05500.2 | No alias | type-I-residues E3 ubiquitin ligase (PRT6) | 0.07 | Archaeplastida | |
MA_10429079g0010 | No alias | E3 ubiquitin-protein ligase PRT6 OS=Arabidopsis thaliana... | 0.11 | Archaeplastida | |
MA_10429118g0010 | No alias | type-I-residues E3 ubiquitin ligase (PRT6) | 0.17 | Archaeplastida | |
MA_387g0010 | No alias | type-I-residues E3 ubiquitin ligase (PRT6) | 0.13 | Archaeplastida | |
MA_767141g0010 | No alias | E3 ubiquitin-protein ligase PRT6 OS=Arabidopsis thaliana... | 0.09 | Archaeplastida | |
Mp7g16320.1 | No alias | type-I-residues E3 ubiquitin ligase (PRT6) | 0.09 | Archaeplastida | |
Pp3c10_20380V3.1 | No alias | proteolysis 6 | 0.06 | Archaeplastida | |
Pp3c9_4700V3.1 | No alias | proteolysis 6 | 0.03 | Archaeplastida | |
Smo438209 | No alias | Protein degradation.N-end rule pathway of targeted... | 0.08 | Archaeplastida | |
Solyc09g010830.4.1 | No alias | type-I-residues E3 ubiquitin ligase (PRT6) | 0.07 | Archaeplastida | |
Solyc10g084760.3.1 | No alias | type-I-residues E3 ubiquitin ligase (PRT6) | 0.04 | Archaeplastida | |
Zm00001e016914_P004 | No alias | type-I-residues E3 ubiquitin ligase (PRT6) | 0.12 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | Neighborhood |
BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Neighborhood |
BP | GO:0002097 | tRNA wobble base modification | IEP | Neighborhood |
BP | GO:0002100 | tRNA wobble adenosine to inosine editing | IEP | Neighborhood |
MF | GO:0004000 | adenosine deaminase activity | IEP | Neighborhood |
MF | GO:0004843 | thiol-dependent ubiquitin-specific protease activity | IEP | Neighborhood |
MF | GO:0005085 | guanyl-nucleotide exchange factor activity | IEP | Neighborhood |
MF | GO:0005086 | ARF guanyl-nucleotide exchange factor activity | IEP | Neighborhood |
MF | GO:0005488 | binding | IEP | Neighborhood |
MF | GO:0005515 | protein binding | IEP | Neighborhood |
CC | GO:0005737 | cytoplasm | IEP | Neighborhood |
BP | GO:0006382 | adenosine to inosine editing | IEP | Neighborhood |
BP | GO:0006399 | tRNA metabolic process | IEP | Neighborhood |
BP | GO:0006400 | tRNA modification | IEP | Neighborhood |
BP | GO:0006401 | RNA catabolic process | IEP | Neighborhood |
BP | GO:0006402 | mRNA catabolic process | IEP | Neighborhood |
BP | GO:0006606 | protein import into nucleus | IEP | Neighborhood |
BP | GO:0006810 | transport | IEP | Neighborhood |
BP | GO:0006886 | intracellular protein transport | IEP | Neighborhood |
BP | GO:0006890 | retrograde vesicle-mediated transport, Golgi to ER | IEP | Neighborhood |
BP | GO:0006891 | intra-Golgi vesicle-mediated transport | IEP | Neighborhood |
BP | GO:0006913 | nucleocytoplasmic transport | IEP | Neighborhood |
BP | GO:0008104 | protein localization | IEP | Neighborhood |
MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | Neighborhood |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | Neighborhood |
MF | GO:0008251 | tRNA-specific adenosine deaminase activity | IEP | Neighborhood |
MF | GO:0008565 | protein transporter activity | IEP | Neighborhood |
BP | GO:0009892 | negative regulation of metabolic process | IEP | Neighborhood |
BP | GO:0009966 | regulation of signal transduction | IEP | Neighborhood |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0010629 | negative regulation of gene expression | IEP | Neighborhood |
BP | GO:0010646 | regulation of cell communication | IEP | Neighborhood |
BP | GO:0015031 | protein transport | IEP | Neighborhood |
BP | GO:0015833 | peptide transport | IEP | Neighborhood |
BP | GO:0016192 | vesicle-mediated transport | IEP | Neighborhood |
BP | GO:0016197 | endosomal transport | IEP | Neighborhood |
BP | GO:0016482 | cytosolic transport | IEP | Neighborhood |
BP | GO:0016553 | base conversion or substitution editing | IEP | Neighborhood |
MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Neighborhood |
MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | Neighborhood |
BP | GO:0017038 | protein import | IEP | Neighborhood |
MF | GO:0019239 | deaminase activity | IEP | Neighborhood |
MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | Neighborhood |
MF | GO:0019899 | enzyme binding | IEP | Neighborhood |
BP | GO:0023051 | regulation of signaling | IEP | Neighborhood |
CC | GO:0030173 | integral component of Golgi membrane | IEP | Neighborhood |
CC | GO:0030906 | retromer, cargo-selective complex | IEP | Neighborhood |
CC | GO:0031228 | intrinsic component of Golgi membrane | IEP | Neighborhood |
CC | GO:0031300 | intrinsic component of organelle membrane | IEP | Neighborhood |
CC | GO:0031301 | integral component of organelle membrane | IEP | Neighborhood |
BP | GO:0032012 | regulation of ARF protein signal transduction | IEP | Neighborhood |
BP | GO:0033036 | macromolecule localization | IEP | Neighborhood |
BP | GO:0033365 | protein localization to organelle | IEP | Neighborhood |
BP | GO:0034504 | protein localization to nucleus | IEP | Neighborhood |
BP | GO:0034613 | cellular protein localization | IEP | Neighborhood |
BP | GO:0034660 | ncRNA metabolic process | IEP | Neighborhood |
MF | GO:0035091 | phosphatidylinositol binding | IEP | Neighborhood |
MF | GO:0036459 | thiol-dependent ubiquitinyl hydrolase activity | IEP | Neighborhood |
BP | GO:0042147 | retrograde transport, endosome to Golgi | IEP | Neighborhood |
BP | GO:0042886 | amide transport | IEP | Neighborhood |
CC | GO:0044431 | Golgi apparatus part | IEP | Neighborhood |
CC | GO:0044464 | cell part | IEP | Neighborhood |
BP | GO:0045184 | establishment of protein localization | IEP | Neighborhood |
BP | GO:0046578 | regulation of Ras protein signal transduction | IEP | Neighborhood |
BP | GO:0046907 | intracellular transport | IEP | Neighborhood |
BP | GO:0048193 | Golgi vesicle transport | IEP | Neighborhood |
BP | GO:0048583 | regulation of response to stimulus | IEP | Neighborhood |
MF | GO:0051020 | GTPase binding | IEP | Neighborhood |
BP | GO:0051056 | regulation of small GTPase mediated signal transduction | IEP | Neighborhood |
BP | GO:0051169 | nuclear transport | IEP | Neighborhood |
BP | GO:0051170 | import into nucleus | IEP | Neighborhood |
BP | GO:0051179 | localization | IEP | Neighborhood |
BP | GO:0051234 | establishment of localization | IEP | Neighborhood |
BP | GO:0051641 | cellular localization | IEP | Neighborhood |
BP | GO:0051649 | establishment of localization in cell | IEP | Neighborhood |
BP | GO:0070727 | cellular macromolecule localization | IEP | Neighborhood |
BP | GO:0071702 | organic substance transport | IEP | Neighborhood |
BP | GO:0071705 | nitrogen compound transport | IEP | Neighborhood |
BP | GO:0072594 | establishment of protein localization to organelle | IEP | Neighborhood |
MF | GO:0098772 | molecular function regulator | IEP | Neighborhood |
MF | GO:0101005 | ubiquitinyl hydrolase activity | IEP | Neighborhood |
BP | GO:1902531 | regulation of intracellular signal transduction | IEP | Neighborhood |
No InterPro domains available for this sequence
No external refs found! |