1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01034171001

GSVIVT01034171001


Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000288 (LandPlants) Phylogenetic Tree(s): OG_05_0000288_tree ,
OG_06_0003085 (SeedPlants) Phylogenetic Tree(s): OG_06_0003085_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01034171001
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
AT3G09370 MYB3R-3, AtMYB3R3 myb domain protein 3r-3 0.03 Archaeplastida
Cre09.g399067 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Cre17.g714229 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Gb_05115 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_23921 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_30719 No alias component SNAPC4 of SNAP snRNA transcription factor... 0.02 Archaeplastida
LOC_Os01g62410.1 No alias transcription factor (MYB) 0.05 Archaeplastida
MA_114955g0020 No alias component SNAPC4 of SNAP snRNA transcription factor... 0.02 Archaeplastida
Mp1g24520.1 No alias component SNAPC4 of SNAP snRNA transcription factor... 0.03 Archaeplastida
Pp3c13_8880V3.1 No alias myb domain protein 4r1 0.05 Archaeplastida
Pp3c23_7530V3.1 No alias myb domain protein 77 0.03 Archaeplastida
Solyc09g010820.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e019321_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e023277_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e028763_P001 No alias transcription factor (MYB) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0005244 voltage-gated ion channel activity IEP Neighborhood
MF GO:0005247 voltage-gated chloride channel activity IEP Neighborhood
MF GO:0005253 anion channel activity IEP Neighborhood
MF GO:0005254 chloride channel activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006821 chloride transport IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008308 voltage-gated anion channel activity IEP Neighborhood
BP GO:0009314 response to radiation IEP Neighborhood
BP GO:0009411 response to UV IEP Neighborhood
BP GO:0009416 response to light stimulus IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
MF GO:0015108 chloride transmembrane transporter activity IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
BP GO:0016482 cytosolic transport IEP Neighborhood
MF GO:0022832 voltage-gated channel activity IEP Neighborhood
CC GO:0030906 retromer, cargo-selective complex IEP Neighborhood
CC GO:0031011 Ino80 complex IEP Neighborhood
CC GO:0033202 DNA helicase complex IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0042147 retrograde transport, endosome to Golgi IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
CC GO:0070603 SWI/SNF superfamily-type complex IEP Neighborhood
CC GO:0097346 INO80-type complex IEP Neighborhood
CC GO:1904949 ATPase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 61 107
IPR001005 SANT/Myb 113 159
IPR001005 SANT/Myb 165 208
No external refs found!