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  5. GSVIVT01034196001

GSVIVT01034196001


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).Lys-63-linked polyubiquitination.Ubc13-Uev1 conjugating E2 complex.Ubc13 component


Gene families : OG0002224 (Archaeplastida) Phylogenetic Tree(s): OG0002224_tree ,
OG_05_0002776 (LandPlants) Phylogenetic Tree(s): OG_05_0002776_tree ,
OG_06_0004161 (SeedPlants) Phylogenetic Tree(s): OG_06_0004161_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01034196001
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
LOC_Os05g38550.1 No alias component Ubc13 of Ubc13-Uev1 conjugating E2 complex. E2... 0.07 Archaeplastida
MA_10278819g0010 No alias E2 ubiquitin-conjugating component Ubc7/13/14 of HRD1 E3... 0.04 Archaeplastida
MA_96703g0010 No alias component Ubc13 of Ubc13-Uev1 conjugating E2 complex. E2... 0.03 Archaeplastida
Mp4g07670.1 No alias component Ubc13 of Ubc13-Uev1 conjugating E2 complex. E2... 0.04 Archaeplastida
Solyc04g011430.3.1 No alias component Ubc13 of Ubc13-Uev1 conjugating E2 complex. E2... 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004150 dihydroneopterin aldolase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006575 cellular modified amino acid metabolic process IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006613 cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006760 folic acid-containing compound metabolic process IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008312 7S RNA binding IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016832 aldehyde-lyase activity IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0042558 pteridine-containing compound metabolic process IEP Neighborhood
BP GO:0045047 protein targeting to ER IEP Neighborhood
CC GO:0048500 signal recognition particle IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0070972 protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 11 160
No external refs found!