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  5. GSVIVT01034427001

GSVIVT01034427001


Description : Cytoskeleton.microfilament network.myosin microfilament-based motor protein activities.class VIII myosin


Gene families : OG0000144 (Archaeplastida) Phylogenetic Tree(s): OG0000144_tree ,
OG_05_0000968 (LandPlants) Phylogenetic Tree(s): OG_05_0000968_tree ,
OG_06_0001271 (SeedPlants) Phylogenetic Tree(s): OG_06_0001271_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01034427001

Target Alias Description ECC score Gene Family Method Actions
AT3G19960 ATM1 myosin 1 0.03 Archaeplastida
Cpa|evm.model.tig00000056.26 No alias Myosin-13 OS=Arabidopsis thaliana 0.02 Archaeplastida
Cpa|evm.model.tig00021108.24 No alias Myosin-12 OS=Arabidopsis thaliana 0.02 Archaeplastida
LOC_Os03g48140.1 No alias class XI myosin microfilament-based motor protein 0.07 Archaeplastida
MA_16896g0010 No alias class XI myosin microfilament-based motor protein 0.03 Archaeplastida
MA_20378g0010 No alias class XI myosin microfilament-based motor protein 0.02 Archaeplastida
Pp3c15_13490V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.01 Archaeplastida
Solyc07g041150.4.1 No alias class XI myosin microfilament-based motor protein 0.01 Archaeplastida
Solyc08g061500.3.1 No alias class XI myosin microfilament-based motor protein 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001609 Myosin_head_motor_dom 140 798
IPR000048 IQ_motif_EF-hand-BS 862 881
IPR000048 IQ_motif_EF-hand-BS 816 833
IPR000048 IQ_motif_EF-hand-BS 886 902
No external refs found!