AMTR_s00045p00154580 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00045.167

Description : Protein degradation.peptidase families.serine-type peptidase activities.Rhomboid protease

Gene families : OG0004187 (Archaeplastida) Phylogenetic Tree(s): OG0004187_tree ,
OG_05_0005409 (LandPlants) Phylogenetic Tree(s): OG_05_0005409_tree ,
OG_06_0004436 (SeedPlants) Phylogenetic Tree(s): OG_06_0004436_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00045p00154580
Cluster	HCCA: Cluster_63

Target	Alias	Description	ECC score	Gene Family Method	Actions
Solyc05g016380.4.1	No alias	protease (RBL)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004252	serine-type endopeptidase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular	IEA	Interproscan
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008236	serine-type peptidase activity	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0017171	serine hydrolase activity	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0044425	membrane part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Neighborhood
MF	GO:0004813	alanine-tRNA ligase activity	IEP	Neighborhood
MF	GO:0005543	phospholipid binding	IEP	Neighborhood
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Neighborhood
BP	GO:0006419	alanyl-tRNA aminoacylation	IEP	Neighborhood
BP	GO:0006820	anion transport	IEP	Neighborhood
BP	GO:0006835	dicarboxylic acid transport	IEP	Neighborhood
MF	GO:0008289	lipid binding	IEP	Neighborhood
BP	GO:0015711	organic anion transport	IEP	Neighborhood
BP	GO:0015740	C4-dicarboxylate transport	IEP	Neighborhood
BP	GO:0015743	malate transport	IEP	Neighborhood
BP	GO:0015849	organic acid transport	IEP	Neighborhood
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Neighborhood
MF	GO:0032182	ubiquitin-like protein binding	IEP	Neighborhood
MF	GO:0032266	phosphatidylinositol-3-phosphate binding	IEP	Neighborhood
MF	GO:0035091	phosphatidylinositol binding	IEP	Neighborhood
BP	GO:0043038	amino acid activation	IEP	Neighborhood
BP	GO:0043039	tRNA aminoacylation	IEP	Neighborhood
MF	GO:0043130	ubiquitin binding	IEP	Neighborhood
BP	GO:0046942	carboxylic acid transport	IEP	Neighborhood
MF	GO:1901981	phosphatidylinositol phosphate binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR022764	Peptidase_S54_rhomboid_dom	69	217
IPR001876	Znf_RanBP2	276	297

External Links

No external refs found!