GSVIVT01034675001

Description : Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana

Gene families : OG0000215 (Archaeplastida) Phylogenetic Tree(s): OG0000215_tree ,
OG_05_0000100 (LandPlants) Phylogenetic Tree(s): OG_05_0000100_tree ,
OG_06_0000046 (SeedPlants) Phylogenetic Tree(s): OG_06_0000046_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01034675001
Cluster	HCCA: Cluster_33

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01005320001	No alias	Putative disease resistance RPP13-like protein 1...	0.03	Archaeplastida
GSVIVT01013307001	No alias	Putative disease resistance RPP13-like protein 1...	0.02	Archaeplastida
GSVIVT01013533001	No alias	Putative disease resistance RPP13-like protein 1...	0.02	Archaeplastida
GSVIVT01023320001	No alias	Putative disease resistance RPP13-like protein 1...	0.02	Archaeplastida
GSVIVT01028665001	No alias	No description available	0.02	Archaeplastida
LOC_Os05g41290.1	No alias	Disease resistance protein RGA2 OS=Solanum bulbocastanum...	0.02	Archaeplastida
LOC_Os06g41480.1	No alias	Putative disease resistance protein RGA3 OS=Solanum...	0.03	Archaeplastida
LOC_Os07g17220.1	No alias	Putative disease resistance protein At3g14460...	0.04	Archaeplastida
LOC_Os08g43010.1	No alias	Putative disease resistance protein RGA1 OS=Solanum...	0.03	Archaeplastida
LOC_Os09g14490.1	No alias	Putative disease resistance RPP13-like protein 1...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004559	alpha-mannosidase activity	IEP	Neighborhood
MF	GO:0004571	mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	IEP	Neighborhood
MF	GO:0005509	calcium ion binding	IEP	Neighborhood
BP	GO:0006457	protein folding	IEP	Neighborhood
MF	GO:0015923	mannosidase activity	IEP	Neighborhood
MF	GO:0015924	mannosyl-oligosaccharide mannosidase activity	IEP	Neighborhood
MF	GO:0051082	unfolded protein binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001611	Leu-rich_rpt	267	322
IPR002182	NB-ARC	4	76

External Links

No external refs found!