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  5. GSVIVT01034705001

GSVIVT01034705001


Description : RNA biosynthesis.transcriptional activation.Trihelix transcription factor


Gene families : OG0000662 (Archaeplastida) Phylogenetic Tree(s): OG0000662_tree ,
OG_05_0000467 (LandPlants) Phylogenetic Tree(s): OG_05_0000467_tree ,
OG_06_0008611 (SeedPlants) Phylogenetic Tree(s): OG_06_0008611_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01034705001
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00200990 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.Trihelix... 0.03 Archaeplastida
AMTR_s00041p00147950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.Trihelix... 0.05 Archaeplastida
AT1G76880 No alias Duplicated homeodomain-like superfamily protein 0.05 Archaeplastida
AT3G10000 EDA31 Homeodomain-like superfamily protein 0.05 Archaeplastida
AT5G03680 PTL Duplicated homeodomain-like superfamily protein 0.04 Archaeplastida
Gb_07284 No alias transcription factor (Trihelix) 0.03 Archaeplastida
LOC_Os02g01380.1 No alias transcription factor (Trihelix) 0.03 Archaeplastida
LOC_Os04g45750.1 No alias transcription factor (Trihelix) 0.04 Archaeplastida
LOC_Os10g37240.4 No alias Trihelix transcription factor GT-2 OS=Arabidopsis... 0.04 Archaeplastida
MA_10427500g0020 No alias transcription factor (Trihelix) 0.03 Archaeplastida
MA_10433499g0020 No alias transcription factor (Trihelix) 0.04 Archaeplastida
MA_331768g0010 No alias Trihelix transcription factor GT-2 OS=Arabidopsis... 0.03 Archaeplastida
MA_331768g0020 No alias transcription factor (Trihelix) 0.03 Archaeplastida
MA_47951g0010 No alias transcription factor (Trihelix) 0.05 Archaeplastida
MA_6958740g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_79619g0010 No alias transcription factor (Trihelix) 0.04 Archaeplastida
MA_934266g0010 No alias transcription factor (Trihelix) 0.04 Archaeplastida
Pp3c18_11190V3.1 No alias Duplicated homeodomain-like superfamily protein 0.03 Archaeplastida
Pp3c18_11300V3.1 No alias Duplicated homeodomain-like superfamily protein 0.02 Archaeplastida
Solyc09g009250.3.1 No alias transcription factor (Trihelix) 0.08 Archaeplastida
Zm00001e000092_P003 No alias transcription factor (Trihelix) 0.04 Archaeplastida
Zm00001e004364_P002 No alias transcription factor (Trihelix) 0.05 Archaeplastida
Zm00001e007383_P001 No alias transcription factor (Trihelix) 0.03 Archaeplastida
Zm00001e012540_P001 No alias transcription factor (Trihelix) 0.04 Archaeplastida
Zm00001e013403_P003 No alias transcription factor (Trihelix) 0.03 Archaeplastida
Zm00001e041338_P003 No alias transcription factor (Trihelix) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005337 nucleoside transmembrane transporter activity IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0015858 nucleoside transport IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:1901264 carbohydrate derivative transport IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Neighborhood
BP GO:1901642 nucleoside transmembrane transport IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!