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  5. GSVIVT01034707001

GSVIVT01034707001


Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana


Gene families : OG0009320 (Archaeplastida) Phylogenetic Tree(s): OG0009320_tree ,
OG_05_0114904 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0093160 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01034707001
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
MA_51694g0010 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.03 Archaeplastida
MA_733561g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.07 Archaeplastida
Smo114102 No alias Pentatricopeptide repeat-containing protein At5g27110... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 71 100
IPR002885 Pentatricopeptide_repeat 195 222
IPR002885 Pentatricopeptide_repeat 331 352
IPR002885 Pentatricopeptide_repeat 43 69
IPR002885 Pentatricopeptide_repeat 165 193
IPR002885 Pentatricopeptide_repeat 227 252
IPR002885 Pentatricopeptide_repeat 534 559
IPR002885 Pentatricopeptide_repeat 260 288
IPR002885 Pentatricopeptide_repeat 460 506
IPR002885 Pentatricopeptide_repeat 130 163
IPR002885 Pentatricopeptide_repeat 360 406
IPR032867 DYW_dom 579 643
No external refs found!