1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01034745001

GSVIVT01034745001


Description : Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter


Gene families : OG0000050 (Archaeplastida) Phylogenetic Tree(s): OG0000050_tree ,
OG_05_0000049 (LandPlants) Phylogenetic Tree(s): OG_05_0000049_tree ,
OG_06_0000052 (SeedPlants) Phylogenetic Tree(s): OG_06_0000052_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01034745001
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00097650 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.02 Archaeplastida
AMTR_s00122p00085720 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.07 Archaeplastida
AT3G30842 ATPDR10, PDR10 pleiotropic drug resistance 10 0.01 Archaeplastida
GSVIVT01017201001 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
GSVIVT01034748001 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
GSVIVT01035715001 No alias Solute transport.primary active transport.ABC... 0.01 Archaeplastida
GSVIVT01035784001 No alias Solute transport.primary active transport.ABC... 0.07 Archaeplastida
Gb_15493 No alias subfamily ABCG transporter 0.01 Archaeplastida
Gb_34309 No alias subfamily ABCG transporter 0.03 Archaeplastida
LOC_Os01g08260.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
LOC_Os01g42410.1 No alias subfamily ABCG transporter 0.01 Archaeplastida
LOC_Os09g16449.1 No alias subfamily ABCG transporter 0.01 Archaeplastida
LOC_Os11g37700.1 No alias subfamily ABCG transporter 0.04 Archaeplastida
MA_117094g0010 No alias no description available(sp|h6ws94|pdr1_pethy : 134.0) 0.02 Archaeplastida
MA_12781g0010 No alias ABC transporter G family member 31 OS=Oryza sativa... 0.02 Archaeplastida
MA_12965g0010 No alias subfamily ABCG transporter 0.02 Archaeplastida
MA_949447g0010 No alias subfamily ABCG transporter 0.01 Archaeplastida
Mp2g07030.1 No alias subfamily ABCG transporter 0.01 Archaeplastida
Pp3c16_13830V3.1 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.02 Archaeplastida
Smo429390 No alias Solute transport.primary active transport.ABC... 0.01 Archaeplastida
Solyc01g101070.3.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
Solyc02g081870.4.1 No alias abscisic acid transporter (ABCG31). subfamily ABCG transporter 0.02 Archaeplastida
Solyc05g053610.2.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Solyc09g091670.3.1 No alias subfamily ABCG transporter 0.06 Archaeplastida
Zm00001e020667_P001 No alias subfamily ABCG transporter 0.01 Archaeplastida
Zm00001e039353_P001 No alias subfamily ABCG transporter 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
InterPro domains Description Start Stop
IPR029481 ABC_trans_N 882 947
IPR025314 DUF4219 14 40
IPR003439 ABC_transporter-like 1626 1774
IPR013581 PDR_assoc 1463 1521
IPR003439 ABC_transporter-like 973 1150
IPR013525 ABC_2_trans 1920 2132
IPR013525 ABC_2_trans 1238 1450
IPR001584 Integrase_cat-core 521 637
IPR025724 GAG-pre-integrase_dom 454 507
No external refs found!