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  5. GSVIVT01035023001

GSVIVT01035023001


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL29 component


Gene families : OG0004913 (Archaeplastida) Phylogenetic Tree(s): OG0004913_tree ,
OG_05_0004281 (LandPlants) Phylogenetic Tree(s): OG_05_0004281_tree ,
OG_06_0006050 (SeedPlants) Phylogenetic Tree(s): OG_06_0006050_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01035023001
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
AT3G06680 No alias Ribosomal L29e protein family 0.05 Archaeplastida
AT3G06700 No alias Ribosomal L29e protein family 0.03 Archaeplastida
Cre03.g207050 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 Archaeplastida
Gb_37735 No alias component RPL29 of LSU proteome component 0.05 Archaeplastida
MA_10433318g0010 No alias component RPL29 of LSU proteome component 0.05 Archaeplastida
Mp1g23580.1 No alias component RPL29 of LSU proteome component 0.04 Archaeplastida
Pp3c10_8040V3.1 No alias Ribosomal L29e protein family 0.05 Archaeplastida
Pp3c14_7570V3.1 No alias Ribosomal L29e protein family 0.06 Archaeplastida
Pp3c1_34380V3.1 No alias Ribosomal L29e protein family 0.1 Archaeplastida
Smo228166 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
InterPro domains Description Start Stop
IPR002673 Ribosomal_L29e 3 42
No external refs found!