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  5. GSVIVT01035033001

GSVIVT01035033001


Description : Cell wall.pectin.rhamnogalacturonan I.modification and degradation.alpha-L-arabinofuranosidase activities.bifunctional BXL-type alpha-L-arabinofuranosidase and beta-D-xylosidase


Gene families : OG0000435 (Archaeplastida) Phylogenetic Tree(s): OG0000435_tree ,
OG_05_0000257 (LandPlants) Phylogenetic Tree(s): OG_05_0000257_tree ,
OG_06_0001017 (SeedPlants) Phylogenetic Tree(s): OG_06_0001017_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01035033001
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AT3G19620 No alias Glycosyl hydrolase family protein 0.03 Archaeplastida
AT5G49360 ATBXL1, BXL1 beta-xylosidase 1 0.04 Archaeplastida
AT5G64570 XYL4, ATBXL4 beta-D-xylosidase 4 0.03 Archaeplastida
LOC_Os01g19220.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Archaeplastida
LOC_Os11g19210.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.02 Archaeplastida
LOC_Os11g44950.2 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Archaeplastida
MA_140124g0010 No alias bifunctional alpha-L-arabinofuranosidase and... 0.05 Archaeplastida
Pp3c24_9140V3.1 No alias Glycosyl hydrolase family protein 0.02 Archaeplastida
Smo419541 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 Archaeplastida
Smo80102 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.01 Archaeplastida
Solyc01g079570.3.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Archaeplastida
Zm00001e007432_P001 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
CC GO:0005743 mitochondrial inner membrane IEP Neighborhood
BP GO:0006839 mitochondrial transport IEP Neighborhood
BP GO:0006848 pyruvate transport IEP Neighborhood
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Neighborhood
BP GO:0015718 monocarboxylic acid transport IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
CC GO:0019866 organelle inner membrane IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0098656 anion transmembrane transport IEP Neighborhood
BP GO:1901475 pyruvate transmembrane transport IEP Neighborhood
BP GO:1903825 organic acid transmembrane transport IEP Neighborhood
BP GO:1905039 carboxylic acid transmembrane transport IEP Neighborhood
BP GO:1990542 mitochondrial transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR002772 Glyco_hydro_3_C 393 623
IPR026891 Fn3-like 657 721
IPR001764 Glyco_hydro_3_N 108 349
No external refs found!