GSVIVT01035098001

Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.ERF-type transcription factor

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000007 (SeedPlants) Phylogenetic Tree(s): OG_06_0000007_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01035098001
Cluster	HCCA: Cluster_206

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00268460	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AMTR_s00009p00268560	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00010p00194910	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00016p00092590	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
AMTR_s00021p00185480	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00023p00044590	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00077p00141890	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AT1G22190	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT1G44830	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT1G71520	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT2G35700	ERF38, ATERF38	ERF family protein 38	0.02	Archaeplastida
AT3G16280	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT4G13620	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT4G18450	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT4G27950	CRF4	cytokinin response factor 4	0.03	Archaeplastida
AT4G31060	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT4G39780	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G07310	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G11190	SHN3	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT5G13330	Rap2.6L	related to AP2 6l	0.03	Archaeplastida
AT5G50080	ERF110	ethylene response factor 110	0.02	Archaeplastida
AT5G61600	ERF104	ethylene response factor 104	0.04	Archaeplastida
AT5G61890	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT5G64750	ABR1	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
GSVIVT01028313001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
GSVIVT01028315001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01033416001	No alias	External stimuli response.biotic...	0.05	Archaeplastida
GSVIVT01035852001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
Gb_12583	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_24321	No alias	transcription factor (DREB)	0.04	Archaeplastida
Gb_29220	No alias	transcription factor (ERF)	0.04	Archaeplastida
Gb_35015	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os01g10370.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
LOC_Os01g12440.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os01g21120.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os01g64790.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os02g32140.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os02g52670.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os03g08460.1	No alias	Ethylene-responsive transcription factor ERF073...	0.02	Archaeplastida
LOC_Os03g64260.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os04g46220.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os04g46440.1	No alias	transcription factor (DREB)	0.05	Archaeplastida
LOC_Os04g52090.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os04g57340.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os05g36100.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os05g41760.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os05g41780.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os06g10780.1	No alias	transcription factor (DREB)	0.05	Archaeplastida
LOC_Os08g31580.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os08g41030.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os10g41130.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_10003489g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_10430769g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_10432800g0020	No alias	transcription factor (ERF)	0.05	Archaeplastida
MA_135279g0010	No alias	transcription factor (ERF)	0.04	Archaeplastida
MA_2040g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_4481564g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_500288g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_83118g0010	No alias	transcription factor (DREB)	0.04	Archaeplastida
MA_912855g0010	No alias	transcription factor (ERF)	0.04	Archaeplastida
Mp1g20040.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Mp7g13760.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
Pp3c11_10660V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c16_13260V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c16_3770V3.1	No alias	erf domain protein 9	0.03	Archaeplastida
Pp3c21_13130V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c26_1890V3.1	No alias	erf domain protein 9	0.03	Archaeplastida
Pp3c5_4370V3.1	No alias	No annotation	0.04	Archaeplastida
Pp3c6_28290V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
Pp3c6_28370V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c9_2020V3.1	No alias	erf domain protein 9	0.03	Archaeplastida
Solyc01g090560.4.1	No alias	transcription factor (DREB)	0.05	Archaeplastida
Solyc03g026280.3.1	No alias	transcription factor (DREB). transcription factor (CBF/DREB1)	0.03	Archaeplastida
Solyc03g114440.1.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.04	Archaeplastida
Solyc03g117230.1.1	No alias	Ethylene-responsive transcription factor ERF084...	0.05	Archaeplastida
Solyc04g054910.4.1	No alias	transcription factor (DREB)	0.05	Archaeplastida
Solyc04g071770.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc04g072900.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc04g080910.1.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
Solyc05g013540.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc05g052040.1.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
Solyc08g066660.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc10g006130.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc11g011750.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc11g042560.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc12g042210.2.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e001139_P001	No alias	Ethylene-responsive transcription factor ERF014...	0.03	Archaeplastida
Zm00001e006604_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e006982_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e013685_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e014008_P002	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.06	Archaeplastida
Zm00001e014413_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e014415_P001	No alias	transcription factor (DREB)	0.04	Archaeplastida
Zm00001e015327_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e019567_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e021579_P001	No alias	Pathogenesis-related genes transcriptional activator...	0.02	Archaeplastida
Zm00001e022016_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e022864_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e023686_P001	No alias	transcription factor (ERF)	0.05	Archaeplastida
Zm00001e023759_P001	No alias	Ethylene-responsive transcription factor ERF017...	0.03	Archaeplastida
Zm00001e023804_P001	No alias	Ethylene-responsive transcription factor ERF013...	0.03	Archaeplastida
Zm00001e023816_P001	No alias	no hits & (original description: none)	0.04	Archaeplastida
Zm00001e027351_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e028920_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e031497_P001	No alias	Ethylene-responsive transcription factor ABI4 OS=Oryza...	0.03	Archaeplastida
Zm00001e032032_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e032033_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e036130_P001	No alias	transcription factor (DREB)	0.04	Archaeplastida
Zm00001e037404_P001	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.03	Archaeplastida
Zm00001e037869_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e040033_P001	No alias	No annotation	0.02	Archaeplastida
Zm00001e041288_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e041620_P002	No alias	transcription factor (ERF)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEP	Neighborhood
CC	GO:0005811	lipid droplet	IEP	Neighborhood
CC	GO:0012511	monolayer-surrounded lipid storage body	IEP	Neighborhood
CC	GO:0032993	protein-DNA complex	IEP	Neighborhood
CC	GO:0044427	chromosomal part	IEP	Neighborhood
CC	GO:0044815	DNA packaging complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	89	138

External Links

No external refs found!

GSVIVT01035098001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation