Description : Cell wall.pectin.homogalacturonan.modification and degradation.pectin methylesterase
Gene families : OG0000046 (Archaeplastida) Phylogenetic Tree(s): OG0000046_tree ,
OG_05_0004714 (LandPlants) Phylogenetic Tree(s): OG_05_0004714_tree ,
OG_06_0005033 (SeedPlants) Phylogenetic Tree(s): OG_06_0005033_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01035108001 | |
Cluster | HCCA: Cluster_48 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00003p00238240 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
AMTR_s00003p00239700 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.05 | Archaeplastida | |
AMTR_s00007p00101250 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
AMTR_s00033p00227850 | evm_27.TU.AmTr_v1... | Probable pectinesterase/pectinesterase inhibitor 21... | 0.05 | Archaeplastida | |
AMTR_s00040p00188020 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.05 | Archaeplastida | |
AMTR_s00129p00028250 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.07 | Archaeplastida | |
AT1G11580 | ATPMEPCRA, PMEPCRA | methylesterase PCR A | 0.03 | Archaeplastida | |
AT1G23200 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
AT1G53830 | ATPME2, PME2 | pectin methylesterase 2 | 0.02 | Archaeplastida | |
AT2G26450 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.05 | Archaeplastida | |
AT2G43050 | ATPMEPCRD | Plant invertase/pectin methylesterase inhibitor superfamily | 0.06 | Archaeplastida | |
AT3G05610 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.04 | Archaeplastida | |
AT3G06830 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.04 | Archaeplastida | |
AT3G43270 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.04 | Archaeplastida | |
AT3G59010 | PME61 | pectin methylesterase 61 | 0.03 | Archaeplastida | |
AT4G15980 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.04 | Archaeplastida | |
AT4G33230 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.04 | Archaeplastida | |
AT5G04970 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
AT5G20860 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.04 | Archaeplastida | |
GSVIVT01015000001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
GSVIVT01028264001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | Archaeplastida | |
GSVIVT01037344001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.06 | Archaeplastida | |
GSVIVT01037352001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.05 | Archaeplastida | |
Gb_10523 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Gb_28387 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
Gb_36012 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
LOC_Os01g13320.1 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
LOC_Os01g21034.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
LOC_Os02g54190.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
LOC_Os03g18860.1 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
LOC_Os04g38560.1 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
LOC_Os04g54850.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
LOC_Os07g49100.1 | No alias | pectin methylesterase | 0.08 | Archaeplastida | |
LOC_Os08g34910.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
LOC_Os09g26360.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
MA_10372207g0010 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
MA_648837g0010 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
MA_84680g0010 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Mp8g00060.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Mp8g09330.1 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Pp3c17_6440V3.1 | No alias | pectin methylesterase PCR fragment F | 0.02 | Archaeplastida | |
Pp3c18_22120V3.1 | No alias | pectin methylesterase PCR fragment F | 0.04 | Archaeplastida | |
Pp3c21_11740V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | Archaeplastida | |
Pp3c26_2170V3.1 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | Archaeplastida | |
Smo420760 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
Solyc01g057220.3.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc01g066360.3.1 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
Solyc01g066390.4.1 | No alias | Probable pectinesterase/pectinesterase inhibitor 58... | 0.05 | Archaeplastida | |
Solyc01g066420.3.1 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
Solyc01g099940.3.1 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
Solyc03g078090.4.1 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
Solyc07g017560.4.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc07g017600.3.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Solyc12g099410.2.1 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
Zm00001e004056_P002 | No alias | no hits & (original description: none) | 0.09 | Archaeplastida | |
Zm00001e006791_P001 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Zm00001e009863_P001 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
Zm00001e017514_P001 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Zm00001e026790_P001 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
Zm00001e034231_P001 | No alias | pectin methylesterase | 0.06 | Archaeplastida | |
Zm00001e035932_P003 | No alias | pectin methylesterase | 0.08 | Archaeplastida | |
Zm00001e041006_P001 | No alias | pectin methylesterase | 0.07 | Archaeplastida | |
Zm00001e041757_P001 | No alias | pectin methylesterase | 0.04 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0030599 | pectinesterase activity | IEA | Interproscan |
BP | GO:0042545 | cell wall modification | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004672 | protein kinase activity | IEP | Neighborhood |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Neighborhood |
MF | GO:0005085 | guanyl-nucleotide exchange factor activity | IEP | Neighborhood |
MF | GO:0005086 | ARF guanyl-nucleotide exchange factor activity | IEP | Neighborhood |
MF | GO:0005215 | transporter activity | IEP | Neighborhood |
MF | GO:0005543 | phospholipid binding | IEP | Neighborhood |
BP | GO:0006464 | cellular protein modification process | IEP | Neighborhood |
BP | GO:0006468 | protein phosphorylation | IEP | Neighborhood |
BP | GO:0006793 | phosphorus metabolic process | IEP | Neighborhood |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0006810 | transport | IEP | Neighborhood |
BP | GO:0006811 | ion transport | IEP | Neighborhood |
BP | GO:0006812 | cation transport | IEP | Neighborhood |
BP | GO:0008152 | metabolic process | IEP | Neighborhood |
MF | GO:0008289 | lipid binding | IEP | Neighborhood |
MF | GO:0008324 | cation transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0008519 | ammonium transmembrane transporter activity | IEP | Neighborhood |
BP | GO:0009966 | regulation of signal transduction | IEP | Neighborhood |
BP | GO:0010646 | regulation of cell communication | IEP | Neighborhood |
MF | GO:0015075 | ion transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0015078 | proton transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0015298 | solute:cation antiporter activity | IEP | Neighborhood |
MF | GO:0015299 | solute:proton antiporter activity | IEP | Neighborhood |
BP | GO:0015696 | ammonium transport | IEP | Neighborhood |
MF | GO:0016301 | kinase activity | IEP | Neighborhood |
BP | GO:0016310 | phosphorylation | IEP | Neighborhood |
MF | GO:0016491 | oxidoreductase activity | IEP | Neighborhood |
BP | GO:0016567 | protein ubiquitination | IEP | Neighborhood |
MF | GO:0016740 | transferase activity | IEP | Neighborhood |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Neighborhood |
BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Neighborhood |
MF | GO:0019899 | enzyme binding | IEP | Neighborhood |
MF | GO:0022857 | transmembrane transporter activity | IEP | Neighborhood |
BP | GO:0023051 | regulation of signaling | IEP | Neighborhood |
BP | GO:0032012 | regulation of ARF protein signal transduction | IEP | Neighborhood |
BP | GO:0032446 | protein modification by small protein conjugation | IEP | Neighborhood |
BP | GO:0036211 | protein modification process | IEP | Neighborhood |
BP | GO:0043412 | macromolecule modification | IEP | Neighborhood |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
BP | GO:0046578 | regulation of Ras protein signal transduction | IEP | Neighborhood |
BP | GO:0048583 | regulation of response to stimulus | IEP | Neighborhood |
MF | GO:0051020 | GTPase binding | IEP | Neighborhood |
BP | GO:0051056 | regulation of small GTPase mediated signal transduction | IEP | Neighborhood |
BP | GO:0051179 | localization | IEP | Neighborhood |
BP | GO:0051234 | establishment of localization | IEP | Neighborhood |
BP | GO:0055114 | oxidation-reduction process | IEP | Neighborhood |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Neighborhood |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:1902531 | regulation of intracellular signal transduction | IEP | Neighborhood |
No external refs found! |