1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00045p00169080

AMTR_s00045p00169080 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00045.201

Description : Protein trichome birefringence-like 6 OS=Arabidopsis thaliana


Gene families : OG0000059 (Archaeplastida) Phylogenetic Tree(s): OG0000059_tree ,
OG_05_0000507 (LandPlants) Phylogenetic Tree(s): OG_05_0000507_tree ,
OG_06_0000491 (SeedPlants) Phylogenetic Tree(s): OG_06_0000491_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00045p00169080
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AT2G30010 TBL45 TRICHOME BIREFRINGENCE-LIKE 45 0.02 Archaeplastida
LOC_Os01g46350.1 No alias Protein trichome birefringence-like 38 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os11g01370.1 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
MA_128999g0010 No alias Protein trichome birefringence-like 11 OS=Arabidopsis... 0.03 Archaeplastida
Solyc07g006920.3.1 No alias Protein trichome birefringence-like 5 OS=Arabidopsis... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Neighborhood
BP GO:0000077 DNA damage checkpoint IEP Neighborhood
MF GO:0003951 NAD+ kinase activity IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006739 NADP metabolic process IEP Neighborhood
BP GO:0006741 NADP biosynthetic process IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Neighborhood
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Neighborhood
CC GO:0030896 checkpoint clamp complex IEP Neighborhood
BP GO:0031570 DNA integrity checkpoint IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
BP GO:0045786 negative regulation of cell cycle IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR025846 PMR5_N_dom 74 127
IPR026057 PC-Esterase 128 409
No external refs found!