1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01035141001

GSVIVT01035141001


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL22 component


Gene families : OG0002238 (Archaeplastida) Phylogenetic Tree(s): OG0002238_tree ,
OG_05_0002172 (LandPlants) Phylogenetic Tree(s): OG_05_0002172_tree ,
OG_06_0002838 (SeedPlants) Phylogenetic Tree(s): OG_06_0002838_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01035141001
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00189250 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.11 Archaeplastida
AT3G05560 No alias Ribosomal L22e protein family 0.3 Archaeplastida
AT5G27770 No alias Ribosomal L22e protein family 0.3 Archaeplastida
Cpa|evm.model.tig00001206.7 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.27 Archaeplastida
Cre07.g357850 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.36 Archaeplastida
Gb_08874 No alias component RPL22 of LSU proteome component 0.23 Archaeplastida
Gb_36164 No alias component RPL22 of LSU proteome component 0.19 Archaeplastida
LOC_Os03g22340.1 No alias component RPL22 of LSU proteome component 0.32 Archaeplastida
LOC_Os07g47710.1 No alias component RPL22 of LSU proteome component 0.24 Archaeplastida
MA_130453g0010 No alias component RPL22 of LSU proteome component 0.2 Archaeplastida
Mp4g02920.1 No alias component RPL22 of LSU proteome component 0.31 Archaeplastida
Pp3c11_630V3.1 No alias Ribosomal L22e protein family 0.29 Archaeplastida
Pp3c11_680V3.1 No alias Ribosomal L22e protein family 0.08 Archaeplastida
Pp3c16_17710V3.1 No alias Ribosomal L22e protein family 0.03 Archaeplastida
Pp3c1_120V3.1 No alias Ribosomal L22e protein family 0.36 Archaeplastida
Pp3c2_28500V3.1 No alias Ribosomal L22e protein family 0.37 Archaeplastida
Pp3c2_28510V3.1 No alias Ribosomal L22e protein family 0.37 Archaeplastida
Pp3c6_5370V3.1 No alias Ribosomal L22e protein family 0.04 Archaeplastida
Pp3c7_27030V3.1 No alias Ribosomal L22e protein family 0.16 Archaeplastida
Smo270704 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 Archaeplastida
Solyc01g099830.3.1 No alias component RPL22 of LSU proteome component 0.37 Archaeplastida
Solyc09g075150.3.1 No alias component RPL22 of LSU proteome component 0.12 Archaeplastida
Solyc09g075155.1.1 No alias component RPL22 of LSU proteome component 0.17 Archaeplastida
Zm00001e010958_P001 No alias component RPL22 of LSU proteome component 0.26 Archaeplastida
Zm00001e035835_P001 No alias component RPL22 of LSU proteome component 0.32 Archaeplastida
Zm00001e038221_P001 No alias component RPL22 of LSU proteome component 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
MF GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002671 Ribosomal_L22e 15 123
No external refs found!