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  5. GSVIVT01035173001

GSVIVT01035173001


Description : SART-1 family protein DOT2 OS=Arabidopsis thaliana


Gene families : OG0003313 (Archaeplastida) Phylogenetic Tree(s): OG0003313_tree ,
OG_05_0006425 (LandPlants) Phylogenetic Tree(s): OG_05_0006425_tree ,
OG_06_0008464 (SeedPlants) Phylogenetic Tree(s): OG_06_0008464_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01035173001
Cluster HCCA: Cluster_232

Target Alias Description ECC score Gene Family Method Actions
AT5G16780 MDF, DOT2 SART-1 family 0.07 Archaeplastida
Gb_00217 No alias SART-1 family protein DOT2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_12198 No alias SART-1 family protein DOT2 OS=Arabidopsis thaliana... 0.1 Archaeplastida
Mp8g09130.1 No alias SART-1 family protein DOT2 OS=Arabidopsis thaliana... 0.09 Archaeplastida
Pp3c15_10170V3.1 No alias SART-1 family 0.02 Archaeplastida
Solyc11g008460.1.1 No alias SART-1 family protein DOT2 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Solyc11g008470.2.1 No alias SART-1 family protein DOT2 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e018582_P001 No alias SART-1 family protein DOT2 OS=Arabidopsis thaliana... 0.09 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0000398 mRNA splicing, via spliceosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR005011 SNU66/SART1 806 852
IPR005011 SNU66/SART1 269 785
No external refs found!