Description : RNA biosynthesis.transcriptional activation.B3 superfamily.ARF transcription factor
Gene families : OG0000080 (Archaeplastida) Phylogenetic Tree(s): OG0000080_tree ,
OG_05_0000516 (LandPlants) Phylogenetic Tree(s): OG_05_0000516_tree ,
OG_06_0000730 (SeedPlants) Phylogenetic Tree(s): OG_06_0000730_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01035204001 | |
Cluster | HCCA: Cluster_123 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT2G28350 | ARF10 | auxin response factor 10 | 0.02 | Archaeplastida | |
GSVIVT01025691001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.04 | Archaeplastida | |
Gb_31132 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Gb_39686 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
LOC_Os06g46410.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
LOC_Os06g48950.1 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
LOC_Os11g32110.1 | No alias | transcription factor (ARF) | 0.05 | Archaeplastida | |
LOC_Os12g29520.1 | No alias | transcription factor (ARF) | 0.05 | Archaeplastida | |
LOC_Os12g41950.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
MA_10432528g0010 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
Mp1g12750.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Mp2g02890.1 | No alias | Auxin response factor 19 OS=Oryza sativa subsp. japonica... | 0.04 | Archaeplastida | |
Pp3c13_4720V3.1 | No alias | auxin response factor 6 | 0.02 | Archaeplastida | |
Pp3c1_40270V3.1 | No alias | auxin response factor 6 | 0.03 | Archaeplastida | |
Solyc05g047460.3.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Zm00001e003229_P002 | No alias | transcription factor (ARF) | 0.07 | Archaeplastida | |
Zm00001e006577_P003 | No alias | transcription factor (ARF) | 0.06 | Archaeplastida | |
Zm00001e006640_P002 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Zm00001e014833_P002 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
Zm00001e018126_P002 | No alias | transcription factor (ARF) | 0.06 | Archaeplastida | |
Zm00001e028396_P001 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Zm00001e030325_P003 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Zm00001e032423_P002 | No alias | transcription factor (ARF) | 0.05 | Archaeplastida | |
Zm00001e041866_P001 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Zm00001e041910_P003 | No alias | transcription factor (ARF) | 0.06 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
CC | GO:0005634 | nucleus | IEA | Interproscan |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
BP | GO:0009725 | response to hormone | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000159 | protein phosphatase type 2A complex | IEP | Neighborhood |
BP | GO:0002097 | tRNA wobble base modification | IEP | Neighborhood |
BP | GO:0002098 | tRNA wobble uridine modification | IEP | Neighborhood |
MF | GO:0003779 | actin binding | IEP | Neighborhood |
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Neighborhood |
MF | GO:0005515 | protein binding | IEP | Neighborhood |
MF | GO:0005524 | ATP binding | IEP | Neighborhood |
CC | GO:0005789 | endoplasmic reticulum membrane | IEP | Neighborhood |
BP | GO:0006400 | tRNA modification | IEP | Neighborhood |
BP | GO:0006464 | cellular protein modification process | IEP | Neighborhood |
BP | GO:0006497 | protein lipidation | IEP | Neighborhood |
BP | GO:0006505 | GPI anchor metabolic process | IEP | Neighborhood |
BP | GO:0006506 | GPI anchor biosynthetic process | IEP | Neighborhood |
BP | GO:0006643 | membrane lipid metabolic process | IEP | Neighborhood |
BP | GO:0006661 | phosphatidylinositol biosynthetic process | IEP | Neighborhood |
BP | GO:0006664 | glycolipid metabolic process | IEP | Neighborhood |
BP | GO:0007010 | cytoskeleton organization | IEP | Neighborhood |
MF | GO:0008092 | cytoskeletal protein binding | IEP | Neighborhood |
MF | GO:0008144 | drug binding | IEP | Neighborhood |
CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | Neighborhood |
BP | GO:0009247 | glycolipid biosynthetic process | IEP | Neighborhood |
MF | GO:0016462 | pyrophosphatase activity | IEP | Neighborhood |
MF | GO:0016787 | hydrolase activity | IEP | Neighborhood |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Neighborhood |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Neighborhood |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Neighborhood |
MF | GO:0016887 | ATPase activity | IEP | Neighborhood |
MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Neighborhood |
MF | GO:0019208 | phosphatase regulator activity | IEP | Neighborhood |
MF | GO:0019888 | protein phosphatase regulator activity | IEP | Neighborhood |
CC | GO:0033588 | Elongator holoenzyme complex | IEP | Neighborhood |
MF | GO:0033926 | glycopeptide alpha-N-acetylgalactosaminidase activity | IEP | Neighborhood |
BP | GO:0036211 | protein modification process | IEP | Neighborhood |
BP | GO:0043412 | macromolecule modification | IEP | Neighborhood |
BP | GO:0045017 | glycerolipid biosynthetic process | IEP | Neighborhood |
BP | GO:0046467 | membrane lipid biosynthetic process | IEP | Neighborhood |
BP | GO:0046474 | glycerophospholipid biosynthetic process | IEP | Neighborhood |
MF | GO:0140103 | catalytic activity, acting on a glycoprotein | IEP | Neighborhood |
CC | GO:1903293 | phosphatase complex | IEP | Neighborhood |
BP | GO:1903509 | liposaccharide metabolic process | IEP | Neighborhood |
No external refs found! |