GSVIVT01035214001

Description : RNA biosynthesis.transcriptional activation.NAC transcription factor

Gene families : OG0000008 (Archaeplastida) Phylogenetic Tree(s): OG0000008_tree ,
OG_05_0000015 (LandPlants) Phylogenetic Tree(s): OG_05_0000015_tree ,
OG_06_0000234 (SeedPlants) Phylogenetic Tree(s): OG_06_0000234_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01035214001
Cluster	HCCA: Cluster_2

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00252470	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
AMTR_s00011p00251570	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
AMTR_s00037p00144010	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
AMTR_s00044p00058470	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.1	Archaeplastida
AMTR_s00044p00058960	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.08	Archaeplastida
AMTR_s00058p00136280	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.07	Archaeplastida
AMTR_s00079p00099620	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
AMTR_s00092p00142980	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AT1G52880	ANAC018, NAM,...	NAC (No Apical Meristem) domain transcriptional...	0.03	Archaeplastida
AT1G65910	anac028, NAC028	NAC domain containing protein 28	0.08	Archaeplastida
AT3G03200	anac045, NAC045	NAC domain containing protein 45	0.22	Archaeplastida
AT3G17730	anac057, NAC057	NAC domain containing protein 57	0.18	Archaeplastida
AT3G49530	ANAC062, NAC062, NTL6	NAC domain containing protein 62	0.04	Archaeplastida
AT5G17260	NAC086, anac086	NAC domain containing protein 86	0.23	Archaeplastida
Gb_13957	No alias	transcription factor (NAC)	0.03	Archaeplastida
Gb_37720	No alias	transcription factor (NAC)	0.04	Archaeplastida
Gb_41026	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os03g04070.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os03g42630.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os04g38720.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os06g04090.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os08g02160.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_10426704g0010	No alias	transcription factor (NAC)	0.07	Archaeplastida
MA_10431997g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_15204g0010	No alias	transcription factor (NAC)	0.04	Archaeplastida
MA_167321g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_18939g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_42101g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
Mp6g02620.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Mp6g20920.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Pp3c26_13950V3.1	No alias	NAC 007	0.03	Archaeplastida
Pp3c8_6080V3.1	No alias	NAC domain containing protein 2	0.04	Archaeplastida
Solyc02g036430.2.1	No alias	transcription factor (NAC)	0.24	Archaeplastida
Solyc03g080090.4.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc03g083880.4.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc03g097650.3.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc05g021090.4.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc06g034340.3.1	No alias	transcription factor (NAC)	0.05	Archaeplastida
Solyc06g069100.3.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc06g073050.2.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc07g045030.4.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc07g062840.3.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc08g079120.3.1	No alias	transcription factor (NAC)	0.09	Archaeplastida
Zm00001e000198_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e005863_P002	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e006914_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e007603_P002	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e009234_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e019017_P002	No alias	transcription factor (NAC)	0.05	Archaeplastida
Zm00001e019046_P002	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e023108_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e029404_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e029913_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e034913_P002	No alias	transcription factor (NAC)	0.16	Archaeplastida
Zm00001e034914_P001	No alias	transcription factor (NAC)	0.05	Archaeplastida
Zm00001e036720_P002	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e039246_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity	IEP	Neighborhood
BP	GO:0001932	regulation of protein phosphorylation	IEP	Neighborhood
MF	GO:0004435	phosphatidylinositol phospholipase C activity	IEP	Neighborhood
MF	GO:0004620	phospholipase activity	IEP	Neighborhood
MF	GO:0004629	phospholipase C activity	IEP	Neighborhood
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Neighborhood
MF	GO:0005543	phospholipid binding	IEP	Neighborhood
MF	GO:0005544	calcium-dependent phospholipid binding	IEP	Neighborhood
BP	GO:0005985	sucrose metabolic process	IEP	Neighborhood
BP	GO:0006399	tRNA metabolic process	IEP	Neighborhood
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Neighborhood
BP	GO:0006629	lipid metabolic process	IEP	Neighborhood
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	Neighborhood
MF	GO:0008289	lipid binding	IEP	Neighborhood
MF	GO:0016157	sucrose synthase activity	IEP	Neighborhood
MF	GO:0016298	lipase activity	IEP	Neighborhood
MF	GO:0016874	ligase activity	IEP	Neighborhood
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Neighborhood
BP	GO:0019220	regulation of phosphate metabolic process	IEP	Neighborhood
MF	GO:0019900	kinase binding	IEP	Neighborhood
MF	GO:0019901	protein kinase binding	IEP	Neighborhood
BP	GO:0031399	regulation of protein modification process	IEP	Neighborhood
BP	GO:0032268	regulation of cellular protein metabolic process	IEP	Neighborhood
BP	GO:0034660	ncRNA metabolic process	IEP	Neighborhood
BP	GO:0042325	regulation of phosphorylation	IEP	Neighborhood
BP	GO:0043038	amino acid activation	IEP	Neighborhood
BP	GO:0043039	tRNA aminoacylation	IEP	Neighborhood
BP	GO:0043549	regulation of kinase activity	IEP	Neighborhood
BP	GO:0045859	regulation of protein kinase activity	IEP	Neighborhood
BP	GO:0050790	regulation of catalytic activity	IEP	Neighborhood
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	Neighborhood
BP	GO:0051246	regulation of protein metabolic process	IEP	Neighborhood
BP	GO:0051338	regulation of transferase activity	IEP	Neighborhood
BP	GO:0065009	regulation of molecular function	IEP	Neighborhood
BP	GO:0071900	regulation of protein serine/threonine kinase activity	IEP	Neighborhood
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	Neighborhood
BP	GO:1904029	regulation of cyclin-dependent protein kinase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	7	133

External Links

No external refs found!

GSVIVT01035214001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation