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  5. GSVIVT01035231001

GSVIVT01035231001


Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor


Gene families : OG0000637 (Archaeplastida) Phylogenetic Tree(s): OG0000637_tree ,
OG_05_0000630 (LandPlants) Phylogenetic Tree(s): OG_05_0000630_tree ,
OG_06_0000581 (SeedPlants) Phylogenetic Tree(s): OG_06_0000581_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01035231001
Cluster HCCA: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00072910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
AT1G01520 No alias Homeodomain-like superfamily protein 0.05 Archaeplastida
AT3G09600 No alias Homeodomain-like superfamily protein 0.06 Archaeplastida
AT5G17300 RVE1 Homeodomain-like superfamily protein 0.1 Archaeplastida
Cre06.g275350 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
Gb_25658 No alias transcription factor (MYB-related). circadian clock core... 0.09 Archaeplastida
Gb_28874 No alias transcription factor (MYB-related). circadian clock core... 0.11 Archaeplastida
LOC_Os06g51260.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
MA_11267g0020 No alias transcription factor (MYB-related). circadian clock core... 0.07 Archaeplastida
Mp2g14310.1 No alias transcription factor (MYB-related). REVEILLE circadian... 0.03 Archaeplastida
Solyc02g036370.3.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Solyc03g098320.4.1 No alias transcription factor (MYB-related) 0.08 Archaeplastida
Solyc10g084370.3.1 No alias transcription factor (MYB-related). REVEILLE circadian... 0.05 Archaeplastida
Zm00001e013333_P002 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Zm00001e041379_P001 No alias transcription factor (MYB-related) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 60 103
No external refs found!