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  5. AMTR_s00045p00175560

AMTR_s00045p00175560 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00045.209

Description : Calvin cycle protein CP12-2, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0002489 (Archaeplastida) Phylogenetic Tree(s): OG0002489_tree ,
OG_05_0002786 (LandPlants) Phylogenetic Tree(s): OG_05_0002786_tree ,
OG_06_0002905 (SeedPlants) Phylogenetic Tree(s): OG_06_0002905_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00045p00175560
Cluster HCCA: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
AT3G62410 CP12, CP12-2 CP12 domain-containing protein 2 0.05 Archaeplastida
Cre08.g380250 No alias Calvin cycle protein CP12, chloroplastic... 0.04 Archaeplastida
Gb_03515 No alias Calvin cycle protein CP12-2, chloroplastic... 0.12 Archaeplastida
LOC_Os01g19740.1 No alias Calvin cycle protein CP12-2, chloroplastic... 0.03 Archaeplastida
LOC_Os03g19380.1 No alias Calvin cycle protein CP12-2, chloroplastic... 0.03 Archaeplastida
MA_524595g0010 No alias Calvin cycle protein CP12-2, chloroplastic... 0.07 Archaeplastida
Mp2g10550.1 No alias no hits & (original description: none) 0.11 Archaeplastida
Pp3c13_23580V3.1 No alias CP12 domain-containing protein 1 0.02 Archaeplastida
Pp3c19_19100V3.1 No alias CP12 domain-containing protein 2 0.02 Archaeplastida
Pp3c21_11130V3.1 No alias CP12 domain-containing protein 2 0.04 Archaeplastida
Pp3c26_5440V3.1 No alias CP12 domain-containing protein 1 0.04 Archaeplastida
Pp3c3_14430V3.1 No alias CP12 domain-containing protein 1 0.13 Archaeplastida
Solyc06g009630.1.1 No alias Calvin cycle protein CP12-2, chloroplastic... 0.04 Archaeplastida
Zm00001e036178_P001 No alias Calvin cycle protein CP12-2, chloroplastic... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006081 cellular aldehyde metabolic process IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006787 porphyrin-containing compound catabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Neighborhood
MF GO:0009496 plastoquinol--plastocyanin reductase activity IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
CC GO:0009538 photosystem I reaction center IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010109 regulation of photosynthesis IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
BP GO:0015994 chlorophyll metabolic process IEP Neighborhood
BP GO:0015996 chlorophyll catabolic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016854 racemase and epimerase activity IEP Neighborhood
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Neighborhood
BP GO:0017004 cytochrome complex assembly IEP Neighborhood
MF GO:0019203 carbohydrate phosphatase activity IEP Neighborhood
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
MF GO:0030151 molybdenum ion binding IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033015 tetrapyrrole catabolic process IEP Neighborhood
CC GO:0034357 photosynthetic membrane IEP Neighborhood
MF GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0042548 regulation of photosynthesis, light reaction IEP Neighborhood
BP GO:0042549 photosystem II stabilization IEP Neighborhood
CC GO:0042651 thylakoid membrane IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046149 pigment catabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0047746 chlorophyllase activity IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050308 sugar-phosphatase activity IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0051187 cofactor catabolic process IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
MF GO:0052880 oxidoreductase activity, acting on diphenols and related substances as donors, with copper protein as acceptor IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR003823 DUF_CP12 57 126
No external refs found!