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  5. GSVIVT01035334001

GSVIVT01035334001


Description : Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-III complex.VPS32/SNF7 component


Gene families : OG0001223 (Archaeplastida) Phylogenetic Tree(s): OG0001223_tree ,
OG_05_0001557 (LandPlants) Phylogenetic Tree(s): OG_05_0001557_tree ,
OG_06_0001828 (SeedPlants) Phylogenetic Tree(s): OG_06_0001828_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01035334001
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
MA_10430745g0010 No alias component VPS32/SNF7 of ESCRT-III complex 0.03 Archaeplastida
Mp6g10770.1 No alias component VPS32/SNF7 of ESCRT-III complex 0.02 Archaeplastida
Solyc08g065900.4.1 No alias component VPS32/SNF7 of ESCRT-III complex 0.03 Archaeplastida
Zm00001e006080_P003 No alias component VPS32/SNF7 of ESCRT-III complex 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Neighborhood
MF GO:0004620 phospholipase activity IEP Neighborhood
MF GO:0004629 phospholipase C activity IEP Neighborhood
MF GO:0004813 alanine-tRNA ligase activity IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006419 alanyl-tRNA aminoacylation IEP Neighborhood
MF GO:0008081 phosphoric diester hydrolase activity IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR005024 Snf7_fam 20 185
No external refs found!