1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00045p00177240

AMTR_s00045p00177240 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00045.213

Description : Nutrient uptake.iron uptake.chelation-based strategy uptake.phytosiderophore synthesis.nicotianamine synthase


Gene families : OG0001782 (Archaeplastida) Phylogenetic Tree(s): OG0001782_tree ,
OG_05_0001158 (LandPlants) Phylogenetic Tree(s): OG_05_0001158_tree ,
OG_06_0000779 (SeedPlants) Phylogenetic Tree(s): OG_06_0000779_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00045p00177240
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Zm00001e012379_P001 No alias nicotianamine synthase 0.07 Archaeplastida
Zm00001e038344_P001 No alias nicotianamine synthase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0030410 nicotianamine synthase activity IEA Interproscan
BP GO:0030418 nicotianamine biosynthetic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030151 molybdenum ion binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
InterPro domains Description Start Stop
IPR004298 Nicotian_synth 5 272
No external refs found!