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  5. GSVIVT01035391001

GSVIVT01035391001


Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor


Gene families : OG0000200 (Archaeplastida) Phylogenetic Tree(s): OG0000200_tree ,
OG_05_0000106 (LandPlants) Phylogenetic Tree(s): OG_05_0000106_tree ,
OG_06_0000058 (SeedPlants) Phylogenetic Tree(s): OG_06_0000058_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01035391001
Cluster HCCA: Cluster_235

Target Alias Description ECC score Gene Family Method Actions
AT1G03840 MGP C2H2 and C2HC zinc fingers superfamily protein 0.04 Archaeplastida
AT3G50700 IDD2, AtIDD2 indeterminate(ID)-domain 2 0.02 Archaeplastida
Solyc03g098070.3.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Solyc03g121660.3.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Solyc06g072360.3.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc09g065670.3.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e000980_P002 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e010628_P002 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e016559_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e027791_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003989 acetyl-CoA carboxylase activity IEP Neighborhood
BP GO:0006721 terpenoid metabolic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Neighborhood
CC GO:0009317 acetyl-CoA carboxylase complex IEP Neighborhood
BP GO:0016114 terpenoid biosynthetic process IEP Neighborhood
MF GO:0016421 CoA carboxylase activity IEP Neighborhood
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR022755 Znf_C2H2_jaz 53 75
No external refs found!