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  5. GSVIVT01035479001

GSVIVT01035479001


Description : Cytoskeleton.microfilament network.myosin microfilament-based motor protein activities.class XI myosin


Gene families : OG0000144 (Archaeplastida) Phylogenetic Tree(s): OG0000144_tree ,
OG_05_0000575 (LandPlants) Phylogenetic Tree(s): OG_05_0000575_tree ,
OG_06_0000342 (SeedPlants) Phylogenetic Tree(s): OG_06_0000342_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01035479001
Cluster HCCA: Cluster_236

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00027850 evm_27.TU.AmTr_v1... Cytoskeleton.microfilament network.myosin... 0.05 Archaeplastida
AMTR_s00039p00219460 No alias Cytoskeleton.microfilament network.myosin... 0.02 Archaeplastida
AMTR_s00146p00059560 evm_27.TU.AmTr_v1... Cytoskeleton.microfilament network.myosin... 0.02 Archaeplastida
AT1G17580 ATMYA1, XI-1, MYA1 myosin 1 0.04 Archaeplastida
AT4G28710 XIH, ATXIH Myosin family protein with Dil domain 0.03 Archaeplastida
AT4G33200 XI-15, ATXI-I, XI-I myosin, putative 0.03 Archaeplastida
Cpa|evm.model.tig00000056.26 No alias Myosin-13 OS=Arabidopsis thaliana 0.01 Archaeplastida
Cpa|evm.model.tig00000113.17 No alias Myosin-12 OS=Arabidopsis thaliana 0.01 Archaeplastida
Cpa|evm.model.tig00000113.29 No alias No description available 0.01 Archaeplastida
Cpa|evm.model.tig00020614.58 No alias Myosin-8 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_18085 No alias Myosin-11 OS=Arabidopsis thaliana (sp|f4hwy6|myo11_arath : 259.0) 0.01 Archaeplastida
Gb_30020 No alias class XI myosin microfilament-based motor protein 0.03 Archaeplastida
LOC_Os01g51634.1 No alias Myosin-17 OS=Arabidopsis thaliana (sp|f4k5j1|myo17_arath : 822.0) 0.01 Archaeplastida
LOC_Os02g53740.2 No alias class XI myosin microfilament-based motor protein 0.03 Archaeplastida
LOC_Os10g19860.1 No alias class XI myosin microfilament-based motor protein 0.03 Archaeplastida
MA_10434653g0010 No alias Protein OPAQUE1 OS=Zea mays (sp|k7u9n8|op1_maize : 399.0) 0.04 Archaeplastida
MA_113402g0010 No alias Myosin-3 OS=Arabidopsis thaliana (sp|f4i507|myo3_arath : 305.0) 0.02 Archaeplastida
MA_185797g0010 No alias Myosin-1 OS=Arabidopsis thaliana (sp|q9lhe9|myo1_arath : 394.0) 0.06 Archaeplastida
Mp3g23480.1 No alias class VIII myosin microfilament-based motor protein 0.03 Archaeplastida
Pp3c15_13490V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Archaeplastida
Pp3c19_9660V3.1 No alias myosin 1 0.02 Archaeplastida
Smo103418 No alias Cytoskeleton.microfilament network.myosin... 0.07 Archaeplastida
Solyc07g041150.4.1 No alias class XI myosin microfilament-based motor protein 0.03 Archaeplastida
Solyc08g061500.3.1 No alias class XI myosin microfilament-based motor protein 0.07 Archaeplastida
Solyc08g061520.3.1 No alias Myosin-15 OS=Arabidopsis thaliana (sp|q0wpu1|myo15_arath : 724.0) 0.03 Archaeplastida
Zm00001e023767_P001 No alias class XI myosin microfilament-based motor protein 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Neighborhood
CC GO:0000152 nuclear ubiquitin ligase complex IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003909 DNA ligase activity IEP Neighborhood
MF GO:0003910 DNA ligase (ATP) activity IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0003917 DNA topoisomerase type I activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
CC GO:0005680 anaphase-promoting complex IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007062 sister chromatid cohesion IEP Neighborhood
BP GO:0007064 mitotic sister chromatid cohesion IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood
InterPro domains Description Start Stop
IPR002710 Dilute_dom 1343 1446
IPR001609 Myosin_head_motor_dom 61 724
IPR000048 IQ_motif_EF-hand-BS 789 807
IPR000048 IQ_motif_EF-hand-BS 836 856
No external refs found!