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  5. GSVIVT01035481001

GSVIVT01035481001


Description : Endoglucanase 16 OS=Arabidopsis thaliana


Gene families : OG0000093 (Archaeplastida) Phylogenetic Tree(s): OG0000093_tree ,
OG_05_0000198 (LandPlants) Phylogenetic Tree(s): OG_05_0000198_tree ,
OG_06_0002563 (SeedPlants) Phylogenetic Tree(s): OG_06_0002563_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01035481001
Cluster HCCA: Cluster_414

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00234390 evm_27.TU.AmTr_v1... Endoglucanase 16 OS=Arabidopsis thaliana 0.01 Archaeplastida
AMTR_s00099p00070580 evm_27.TU.AmTr_v1... Endoglucanase 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G75680 AtGH9B7, GH9B7 glycosyl hydrolase 9B7 0.02 Archaeplastida
AT4G39000 GH9B17, AtGH9B17 glycosyl hydrolase 9B17 0.01 Archaeplastida
Gb_05872 No alias Endoglucanase 24 OS=Oryza sativa subsp. japonica... 0.01 Archaeplastida
LOC_Os02g53820.1 No alias Endoglucanase 8 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Mp8g17860.1 No alias Endoglucanase 3 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Solyc07g064870.3.1 No alias Endoglucanase 11 OS=Arabidopsis thaliana... 0.17 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Neighborhood
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Neighborhood
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 518 963
IPR001701 Glyco_hydro_9 33 475
No external refs found!