GSVIVT01035621001


Description : Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.NUP75/85 scaffold nucleoporin


Gene families : OG0005377 (Archaeplastida) Phylogenetic Tree(s): OG0005377_tree ,
OG_05_0005551 (LandPlants) Phylogenetic Tree(s): OG_05_0005551_tree ,
OG_06_0010035 (SeedPlants) Phylogenetic Tree(s): OG_06_0010035_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01035621001
Cluster HCCA: Cluster_196

Target Alias Description ECC score Gene Family Method Actions
AT4G32910 No alias CONTAINS InterPro DOMAIN/s: Nuclear pore complex... 0.03 Archaeplastida
Cre08.g383650 No alias No description available 0.02 Archaeplastida
LOC_Os01g54240.1 No alias NUP75/85 scaffold nucleoporin of nuclear pore complex 0.06 Archaeplastida
MA_9208148g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Smo413557 No alias Nuclear pore complex protein NUP85 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc08g066580.4.1 No alias NUP75/85 scaffold nucleoporin of nuclear pore complex 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Neighborhood
CC GO:0000152 nuclear ubiquitin ligase complex IEP Neighborhood
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005680 anaphase-promoting complex IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR011502 Nucleoporin_Nup85 81 677
No external refs found!