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  5. GSVIVT01035660001

GSVIVT01035660001


Description : Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3l component


Gene families : OG0004415 (Archaeplastida) Phylogenetic Tree(s): OG0004415_tree ,
OG_05_0004927 (LandPlants) Phylogenetic Tree(s): OG_05_0004927_tree ,
OG_06_0006987 (SeedPlants) Phylogenetic Tree(s): OG_06_0006987_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01035660001
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00071210 evm_27.TU.AmTr_v1... Protein biosynthesis.translation... 0.05 Archaeplastida
Cpa|evm.model.tig00022075.15 No alias Protein biosynthesis.translation... 0.03 Archaeplastida
Cre17.g697450 No alias Protein biosynthesis.translation... 0.03 Archaeplastida
Gb_07559 No alias component eIF3l of eIF3 mRNA-to-PIC binding complex 0.03 Archaeplastida
LOC_Os05g13950.1 No alias component eIF3l of eIF3 mRNA-to-PIC binding complex 0.08 Archaeplastida
MA_4833g0010 No alias component eIF3l of eIF3 mRNA-to-PIC binding complex 0.03 Archaeplastida
MA_4833g0020 No alias component eIF3l of eIF3 mRNA-to-PIC binding complex 0.05 Archaeplastida
MA_525836g0010 No alias component eIF3l of eIF3 mRNA-to-PIC binding complex 0.03 Archaeplastida
Mp3g02920.1 No alias component eIF3l of eIF3 mRNA-to-PIC binding complex 0.04 Archaeplastida
Pp3c21_22430V3.1 No alias RNA polymerase I-associated factor PAF67 0.03 Archaeplastida
Pp3s48_70V3.1 No alias RNA polymerase I-associated factor PAF67 0.04 Archaeplastida
Smo146079 No alias Protein biosynthesis.translation... 0.03 Archaeplastida
Solyc08g068340.3.1 No alias component eIF3l of eIF3 mRNA-to-PIC binding complex 0.06 Archaeplastida
Zm00001e016402_P001 No alias component eIF3l of eIF3 mRNA-to-PIC binding complex 0.07 Archaeplastida
Zm00001e026109_P001 No alias component eIF3l of eIF3 mRNA-to-PIC binding complex 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003724 RNA helicase activity IEP Neighborhood
MF GO:0004004 ATP-dependent RNA helicase activity IEP Neighborhood
MF GO:0004797 thymidine kinase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008186 RNA-dependent ATPase activity IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0019136 deoxynucleoside kinase activity IEP Neighborhood
MF GO:0019205 nucleobase-containing compound kinase activity IEP Neighborhood
MF GO:0019206 nucleoside kinase activity IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR019382 eIF3l 1 364
No external refs found!