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  5. AMTR_s00045p00194200

AMTR_s00045p00194200 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00045.248

Description : Dynein 8 kDa light chain, flagellar outer arm OS=Chlamydomonas reinhardtii


Gene families : OG0000441 (Archaeplastida) Phylogenetic Tree(s): OG0000441_tree ,
OG_05_0006257 (LandPlants) Phylogenetic Tree(s): OG_05_0006257_tree ,
OG_06_0008982 (SeedPlants) Phylogenetic Tree(s): OG_06_0008982_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00045p00194200
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
LOC_Os06g29690.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c11_9560V3.1 No alias Dynein light chain type 1 family protein 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005875 microtubule associated complex IEA Interproscan
BP GO:0007017 microtubule-based process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0004871 obsolete signal transducer activity IEP Neighborhood
MF GO:0005048 signal sequence binding IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006621 protein retention in ER lumen IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
BP GO:0032507 maintenance of protein location in cell IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Neighborhood
MF GO:0042277 peptide binding IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0045185 maintenance of protein location IEP Neighborhood
MF GO:0046923 ER retention sequence binding IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0051651 maintenance of location in cell IEP Neighborhood
BP GO:0072595 maintenance of protein localization in organelle IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001372 Dynein_light_chain_typ-1/2 33 108
No external refs found!