GSVIVT01035761001

Description : Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana

Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0011456 (LandPlants) Phylogenetic Tree(s): OG_05_0011456_tree ,
OG_06_0010958 (SeedPlants) Phylogenetic Tree(s): OG_06_0010958_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01035761001
Cluster	HCCA: Cluster_19

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00039p00132380	evm_27.TU.AmTr_v1...	Pentatricopeptide repeat-containing protein At3g57430,...	0.02	Archaeplastida
AMTR_s00046p00214930	evm_27.TU.AmTr_v1...	Pentatricopeptide repeat-containing protein At1g11290,...	0.01	Archaeplastida
AT5G46440	No alias	FUNCTIONS IN: molecular_function unknown; INVOLVED IN:...	0.05	Archaeplastida
AT5G46460	No alias	Pentatricopeptide repeat (PPR) superfamily protein	0.06	Archaeplastida
GSVIVT01035618001	No alias	Pentatricopeptide repeat-containing protein At3g09040,...	0.05	Archaeplastida
LOC_Os04g58980.1	No alias	Putative pentatricopeptide repeat-containing protein...	0.07	Archaeplastida
MA_153011g0010	No alias	RNA editing factor (MEF1)	0.06	Archaeplastida
Solyc11g006700.1.1	No alias	Pentatricopeptide repeat-containing protein At5g04780,...	0.03	Archaeplastida
Zm00001e039180_P001	No alias	Pentatricopeptide repeat-containing protein At4g13650...	0.01	Archaeplastida

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0043531	ADP binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	26	51
IPR002885	Pentatricopeptide_repeat	155	180
IPR002885	Pentatricopeptide_repeat	119	146

External Links

No external refs found!