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  5. GSVIVT01035790001

GSVIVT01035790001


Description : RNA biosynthesis.transcriptional repression.LUG transcriptional co-repressor


Gene families : OG0000691 (Archaeplastida) Phylogenetic Tree(s): OG0000691_tree ,
OG_05_0010539 (LandPlants) Phylogenetic Tree(s): OG_05_0010539_tree ,
OG_06_0011408 (SeedPlants) Phylogenetic Tree(s): OG_06_0011408_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01035790001
Cluster HCCA: Cluster_236

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00167320 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional repression.LUG... 0.03 Archaeplastida
AMTR_s00122p00094620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional repression.LUG... 0.02 Archaeplastida
LOC_Os01g42260.1 No alias transcriptional co-repressor (LUG) 0.03 Archaeplastida
MA_34795g0010 No alias transcriptional co-repressor (LUG) 0.03 Archaeplastida
MA_65863g0010 No alias transcriptional co-repressor (LUG) 0.1 Archaeplastida
MA_99040g0010 No alias transcriptional co-repressor (LUG) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR006594 LisH 10 36
No external refs found!