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  5. GSVIVT01035820001

GSVIVT01035820001


Description : UPF0481 protein At3g47200 OS=Arabidopsis thaliana


Gene families : OG0000139 (Archaeplastida) Phylogenetic Tree(s): OG0000139_tree ,
OG_05_0000052 (LandPlants) Phylogenetic Tree(s): OG_05_0000052_tree ,
OG_06_0000062 (SeedPlants) Phylogenetic Tree(s): OG_06_0000062_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01035820001
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AT1G67150 No alias Plant protein of unknown function (DUF247) 0.02 Archaeplastida
AT3G47250 No alias Plant protein of unknown function (DUF247) 0.03 Archaeplastida
GSVIVT01014791001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01035823001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.07 Archaeplastida
Solyc01g057260.4.1 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc04g008920.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004158 DUF247_pln 29 403
No external refs found!