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Description : Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase guanine nucleotide exchange factor (RAB-GEF) activities.EREX canonical RAB5 effector
Gene families : OG0004326 (Archaeplastida) Phylogenetic Tree(s): OG0004326_tree ,
OG_05_0003529 (LandPlants) Phylogenetic Tree(s): OG_05_0003529_tree ,
OG_06_0003825 (SeedPlants) Phylogenetic Tree(s): OG_06_0003825_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01035873001 | |
| Cluster | HCCA: Cluster_220 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G25350 | No alias | Phox (PX) domain-containing protein | 0.03 | Archaeplastida | |
| Cre11.g467681 | No alias | No description available | 0.02 | Archaeplastida | |
| Mp6g03590.1 | No alias | canonical RAB5 effector (EREX) | 0.07 | Archaeplastida | |
| Solyc08g042130.2.1 | No alias | canonical RAB5 effector (EREX) | 0.04 | Archaeplastida | |
| Zm00001e030469_P004 | No alias | canonical RAB5 effector (EREX) | 0.11 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0035091 | phosphatidylinositol binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | Neighborhood |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Neighborhood |
| MF | GO:0004843 | thiol-dependent ubiquitin-specific protease activity | IEP | Neighborhood |
| CC | GO:0005643 | nuclear pore | IEP | Neighborhood |
| CC | GO:0005667 | transcription factor complex | IEP | Neighborhood |
| CC | GO:0005669 | transcription factor TFIID complex | IEP | Neighborhood |
| BP | GO:0006405 | RNA export from nucleus | IEP | Neighborhood |
| BP | GO:0006406 | mRNA export from nucleus | IEP | Neighborhood |
| BP | GO:0006810 | transport | IEP | Neighborhood |
| BP | GO:0006891 | intra-Golgi vesicle-mediated transport | IEP | Neighborhood |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Neighborhood |
| BP | GO:0008104 | protein localization | IEP | Neighborhood |
| MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | Neighborhood |
| MF | GO:0008565 | protein transporter activity | IEP | Neighborhood |
| BP | GO:0015031 | protein transport | IEP | Neighborhood |
| BP | GO:0015833 | peptide transport | IEP | Neighborhood |
| BP | GO:0015931 | nucleobase-containing compound transport | IEP | Neighborhood |
| BP | GO:0016192 | vesicle-mediated transport | IEP | Neighborhood |
| BP | GO:0016197 | endosomal transport | IEP | Neighborhood |
| BP | GO:0016311 | dephosphorylation | IEP | Neighborhood |
| BP | GO:0016482 | cytosolic transport | IEP | Neighborhood |
| BP | GO:0016973 | poly(A)+ mRNA export from nucleus | IEP | Neighborhood |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Neighborhood |
| CC | GO:0030173 | integral component of Golgi membrane | IEP | Neighborhood |
| CC | GO:0030906 | retromer, cargo-selective complex | IEP | Neighborhood |
| CC | GO:0031228 | intrinsic component of Golgi membrane | IEP | Neighborhood |
| CC | GO:0031300 | intrinsic component of organelle membrane | IEP | Neighborhood |
| CC | GO:0031301 | integral component of organelle membrane | IEP | Neighborhood |
| BP | GO:0033036 | macromolecule localization | IEP | Neighborhood |
| BP | GO:0042147 | retrograde transport, endosome to Golgi | IEP | Neighborhood |
| BP | GO:0042886 | amide transport | IEP | Neighborhood |
| CC | GO:0044422 | organelle part | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| CC | GO:0044428 | nuclear part | IEP | Neighborhood |
| CC | GO:0044431 | Golgi apparatus part | IEP | Neighborhood |
| CC | GO:0044446 | intracellular organelle part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| CC | GO:0044798 | nuclear transcription factor complex | IEP | Neighborhood |
| BP | GO:0045184 | establishment of protein localization | IEP | Neighborhood |
| BP | GO:0046907 | intracellular transport | IEP | Neighborhood |
| BP | GO:0048193 | Golgi vesicle transport | IEP | Neighborhood |
| BP | GO:0050657 | nucleic acid transport | IEP | Neighborhood |
| BP | GO:0050658 | RNA transport | IEP | Neighborhood |
| BP | GO:0051028 | mRNA transport | IEP | Neighborhood |
| BP | GO:0051168 | nuclear export | IEP | Neighborhood |
| BP | GO:0051169 | nuclear transport | IEP | Neighborhood |
| BP | GO:0051179 | localization | IEP | Neighborhood |
| BP | GO:0051234 | establishment of localization | IEP | Neighborhood |
| BP | GO:0051236 | establishment of RNA localization | IEP | Neighborhood |
| BP | GO:0051641 | cellular localization | IEP | Neighborhood |
| BP | GO:0051649 | establishment of localization in cell | IEP | Neighborhood |
| BP | GO:0071702 | organic substance transport | IEP | Neighborhood |
| BP | GO:0071705 | nitrogen compound transport | IEP | Neighborhood |
| CC | GO:0090575 | RNA polymerase II transcription factor complex | IEP | Neighborhood |
| CC | GO:0098796 | membrane protein complex | IEP | Neighborhood |
| MF | GO:1990380 | Lys48-specific deubiquitinase activity | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001683 | Phox | 63 | 159 |
| No external refs found! |