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  5. GSVIVT01035897001

GSVIVT01035897001


Description : Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana


Gene families : OG0000981 (Archaeplastida) Phylogenetic Tree(s): OG0000981_tree ,
OG_05_0001237 (LandPlants) Phylogenetic Tree(s): OG_05_0001237_tree ,
OG_06_0001421 (SeedPlants) Phylogenetic Tree(s): OG_06_0001421_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01035897001
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00236350 evm_27.TU.AmTr_v1... RNA processing.RNA decay.deadenylation-dependent... 0.03 Archaeplastida
AMTR_s00065p00182000 evm_27.TU.AmTr_v1... Probable CCR4-associated factor 1 homolog 7... 0.04 Archaeplastida
AT1G15920 No alias Polynucleotidyl transferase, ribonuclease H-like... 0.02 Archaeplastida
AT3G44260 No alias Polynucleotidyl transferase, ribonuclease H-like... 0.06 Archaeplastida
AT5G22250 No alias Polynucleotidyl transferase, ribonuclease H-like... 0.05 Archaeplastida
LOC_Os04g58810.1 No alias Probable CCR4-associated factor 1 homolog 11... 0.03 Archaeplastida
MA_127412g0020 No alias Probable CCR4-associated factor 1 homolog 7... 0.03 Archaeplastida
MA_205414g0010 No alias Probable CCR4-associated factor 1 homolog 7... 0.03 Archaeplastida
MA_2937g0010 No alias Probable CCR4-associated factor 1 homolog 7... 0.04 Archaeplastida
MA_5937864g0010 No alias Probable CCR4-associated factor 1 homolog 7... 0.03 Archaeplastida
Mp8g01530.1 No alias Probable CCR4-associated factor 1 homolog 6... 0.02 Archaeplastida
Solyc06g074030.1.1 No alias deadenylase component CAF1 of CCR4-NOT complex 0.03 Archaeplastida
Solyc11g045130.2.1 No alias Probable CCR4-associated factor 1 homolog 7... 0.03 Archaeplastida
Solyc11g068770.1.1 No alias deadenylase component CAF1 of CCR4-NOT complex 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!