GSVIVT01035911001

Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.ERF-type transcription factor

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0001872 (SeedPlants) Phylogenetic Tree(s): OG_06_0001872_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01035911001
Cluster	HCCA: Cluster_227

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00040p00195730	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00069p00140780	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00069p00141520	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00111p00051610	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00150p00091360	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AT1G12610	DDF1	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT1G28160	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G75490	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G77200	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT2G36450	HRD	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT2G40340	AtERF48, DREB2C	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT3G14230	RAP2.2	related to AP2 2	0.03	Archaeplastida
AT3G25890	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT4G17500	ERF-1, ATERF-1	ethylene responsive element binding factor 1	0.03	Archaeplastida
AT4G25480	DREB1A, ATCBF3, CBF3	dehydration response element B1A	0.02	Archaeplastida
AT5G11590	TINY2	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT5G19790	RAP2.11	related to AP2 11	0.03	Archaeplastida
GSVIVT01036388001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
GSVIVT01036389001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
Gb_00125	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_02790	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_03782	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_07475	No alias	no hits & (original description: none)	0.02	Archaeplastida
Gb_08031	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_09495	No alias	transcription factor (ERF). transcription factor (ERN1)	0.02	Archaeplastida
Gb_11856	No alias	Ethylene-responsive transcription factor RAP2-3...	0.01	Archaeplastida
Gb_23870	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_26667	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_26863	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_34846	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os01g66270.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
LOC_Os02g43940.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os02g43970.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os03g08470.1	No alias	Ethylene-responsive transcription factor 1 OS=Oryza...	0.03	Archaeplastida
LOC_Os03g15660.1	No alias	Ethylene-responsive transcription factor ERF012...	0.03	Archaeplastida
LOC_Os03g22170.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os04g44670.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os04g46240.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os04g46250.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os04g46410.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os06g10780.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os06g11940.1	No alias	Ethylene-responsive transcription factor ERF017...	0.02	Archaeplastida
LOC_Os06g40150.1	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.06	Archaeplastida
LOC_Os07g12510.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os08g07700.1	No alias	Ethylene-responsive transcription factor ERF087...	0.03	Archaeplastida
LOC_Os08g41030.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os11g13840.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_10430769g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_10432141g0020	No alias	Ethylene-responsive transcription factor ERF013...	0.01	Archaeplastida
MA_10432800g0010	No alias	transcription factor (ERF)	0.01	Archaeplastida
MA_54341g0010	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.02	Archaeplastida
MA_5658g0010	No alias	transcription factor (ERF)	0.01	Archaeplastida
MA_6677438g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
Pp3c10_17870V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c11_24520V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c16_13260V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c16_13280V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c16_4710V3.1	No alias	ethylene response factor 7	0.03	Archaeplastida
Pp3c21_13130V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c25_1760V3.1	No alias	related to AP2 11	0.03	Archaeplastida
Pp3c26_1890V3.1	No alias	erf domain protein 9	0.02	Archaeplastida
Pp3c27_5180V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c27_6030V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c4_2660V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c4_2680V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c5_810V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c6_28290V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c7_20200V3.1	No alias	ethylene responsive element binding factor 2	0.01	Archaeplastida
Solyc01g090345.1.1	No alias	Ethylene-responsive transcription factor 13...	0.06	Archaeplastida
Solyc02g077370.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc05g050790.3.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
Solyc06g065820.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc08g066660.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc08g078170.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc09g089930.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e002358_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e006753_P003	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e007350_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e007351_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e009947_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e014659_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e015429_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e021331_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e023224_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e030585_P001	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.03	Archaeplastida
Zm00001e033537_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e040124_P001	No alias	no hits & (original description: none)	0.01	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000062	fatty-acyl-CoA binding	IEP	Neighborhood
MF	GO:0004427	inorganic diphosphatase activity	IEP	Neighborhood
CC	GO:0005783	endoplasmic reticulum	IEP	Neighborhood
BP	GO:0005985	sucrose metabolic process	IEP	Neighborhood
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	Neighborhood
MF	GO:0015267	channel activity	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
MF	GO:0016157	sucrose synthase activity	IEP	Neighborhood
MF	GO:0022803	passive transmembrane transporter activity	IEP	Neighborhood
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	Neighborhood
MF	GO:0043565	sequence-specific DNA binding	IEP	Neighborhood
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	Neighborhood
MF	GO:0046527	glucosyltransferase activity	IEP	Neighborhood
MF	GO:1901567	fatty acid derivative binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	7	56

External Links

No external refs found!

GSVIVT01035911001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation