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  5. GSVIVT01036080001

GSVIVT01036080001


No description available


Gene families : OG0006055 (Archaeplastida) Phylogenetic Tree(s): OG0006055_tree ,
OG_05_0006009 (LandPlants) Phylogenetic Tree(s): OG_05_0006009_tree ,
OG_06_0006358 (SeedPlants) Phylogenetic Tree(s): OG_06_0006358_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01036080001
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00101p00041820 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
AT5G22340 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.08 Archaeplastida
Gb_29637 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os03g20640.1 No alias no hits & (original description: none) 0.09 Archaeplastida
MA_6489281g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp2g17450.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Smo103361 No alias No description available 0.02 Archaeplastida
Solyc11g068680.2.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Zm00001e038285_P001 No alias no hits & (original description: none) 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004392 heme oxygenase (decyclizing) activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006788 heme oxidation IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0010207 photosystem II assembly IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0042168 heme metabolic process IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!