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  5. GSVIVT01036166001

GSVIVT01036166001


Description : Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.VPS4-VTA1 ESCRT-disassembly complex.VPS4/SKD1 ATPase component


Gene families : OG0002917 (Archaeplastida) Phylogenetic Tree(s): OG0002917_tree ,
OG_05_0004375 (LandPlants) Phylogenetic Tree(s): OG_05_0004375_tree ,
OG_06_0005010 (SeedPlants) Phylogenetic Tree(s): OG_06_0005010_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01036166001
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Cre02.g079300 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 Archaeplastida
LOC_Os01g04814.1 No alias ATPase component VPS4/SKD1 of VPS4-VTA1 ESCRT-disassembly complex 0.03 Archaeplastida
MA_34399g0010 No alias ATPase component VPS4/SKD1 of VPS4-VTA1 ESCRT-disassembly complex 0.03 Archaeplastida
MA_67052g0010 No alias Protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1... 0.03 Archaeplastida
Pp3c2_35940V3.1 No alias AAA-type ATPase family protein 0.02 Archaeplastida
Smo267596 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.03 Archaeplastida
Solyc11g067230.2.1 No alias serine carboxypeptidase. ATPase component VPS4/SKD1 of... 0.02 Archaeplastida
Zm00001e016954_P004 No alias ATPase component VPS4/SKD1 of VPS4-VTA1 ESCRT-disassembly complex 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006354 DNA-templated transcription, elongation IEP Neighborhood
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
CC GO:0008023 transcription elongation factor complex IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
CC GO:0016593 Cdc73/Paf1 complex IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 111 240
IPR015415 Vps4_C 310 374
IPR007330 MIT 2 38
No external refs found!