Aliases : evm_27.TU.AmTr_v1.0_scaffold00045.287
No description available
Gene families : OG0005028 (Archaeplastida) Phylogenetic Tree(s): OG0005028_tree ,
OG_05_0015342 (LandPlants) Phylogenetic Tree(s): OG_05_0015342_tree ,
OG_06_0004208 (SeedPlants) Phylogenetic Tree(s): OG_06_0004208_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AMTR_s00045p00210490 | |
Cluster | HCCA: Cluster_249 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G61780 | emb1703 | embryo defective 1703 | 0.04 | Archaeplastida | |
GSVIVT01027152001 | No alias | No description available | 0.03 | Archaeplastida | |
Gb_15616 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
MA_10431636g0010 | No alias | No annotation | 0.02 | Archaeplastida | |
MA_171750g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
Pp3c12_1870V3.1 | No alias | embryo defective 1703 | 0.02 | Archaeplastida | |
Solyc01g080760.4.1 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
Solyc01g096010.4.1 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000228 | nuclear chromosome | IEP | Neighborhood |
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0003916 | DNA topoisomerase activity | IEP | Neighborhood |
MF | GO:0004222 | metalloendopeptidase activity | IEP | Neighborhood |
MF | GO:0004559 | alpha-mannosidase activity | IEP | Neighborhood |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Neighborhood |
MF | GO:0004832 | valine-tRNA ligase activity | IEP | Neighborhood |
MF | GO:0005319 | lipid transporter activity | IEP | Neighborhood |
MF | GO:0005342 | organic acid transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0005343 | organic acid:sodium symporter activity | IEP | Neighborhood |
CC | GO:0005694 | chromosome | IEP | Neighborhood |
CC | GO:0005737 | cytoplasm | IEP | Neighborhood |
BP | GO:0006013 | mannose metabolic process | IEP | Neighborhood |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0006265 | DNA topological change | IEP | Neighborhood |
BP | GO:0006364 | rRNA processing | IEP | Neighborhood |
BP | GO:0006396 | RNA processing | IEP | Neighborhood |
BP | GO:0006399 | tRNA metabolic process | IEP | Neighborhood |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Neighborhood |
BP | GO:0006438 | valyl-tRNA aminoacylation | IEP | Neighborhood |
BP | GO:0006520 | cellular amino acid metabolic process | IEP | Neighborhood |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
BP | GO:0006814 | sodium ion transport | IEP | Neighborhood |
BP | GO:0006996 | organelle organization | IEP | Neighborhood |
MF | GO:0008028 | monocarboxylic acid transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0008237 | metallopeptidase activity | IEP | Neighborhood |
MF | GO:0008508 | bile acid:sodium symporter activity | IEP | Neighborhood |
MF | GO:0008509 | anion transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0008514 | organic anion transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0015081 | sodium ion transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0015125 | bile acid transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0015293 | symporter activity | IEP | Neighborhood |
MF | GO:0015294 | solute:cation symporter activity | IEP | Neighborhood |
MF | GO:0015355 | secondary active monocarboxylate transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0015370 | solute:sodium symporter activity | IEP | Neighborhood |
MF | GO:0015923 | mannosidase activity | IEP | Neighborhood |
BP | GO:0016043 | cellular component organization | IEP | Neighborhood |
BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
BP | GO:0016072 | rRNA metabolic process | IEP | Neighborhood |
MF | GO:0016874 | ligase activity | IEP | Neighborhood |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Neighborhood |
BP | GO:0034470 | ncRNA processing | IEP | Neighborhood |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0034660 | ncRNA metabolic process | IEP | Neighborhood |
BP | GO:0043038 | amino acid activation | IEP | Neighborhood |
BP | GO:0043039 | tRNA aminoacylation | IEP | Neighborhood |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | Neighborhood |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Neighborhood |
BP | GO:0044281 | small molecule metabolic process | IEP | Neighborhood |
BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
MF | GO:0046943 | carboxylic acid transmembrane transporter activity | IEP | Neighborhood |
BP | GO:0051276 | chromosome organization | IEP | Neighborhood |
BP | GO:0071103 | DNA conformation change | IEP | Neighborhood |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | Neighborhood |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Neighborhood |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Neighborhood |
MF | GO:0140161 | monocarboxylate:sodium symporter activity | IEP | Neighborhood |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
MF | GO:1901618 | organic hydroxy compound transmembrane transporter activity | IEP | Neighborhood |
No InterPro domains available for this sequence
No external refs found! |