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  5. AMTR_s00045p00211940

AMTR_s00045p00211940 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00045.292

Description : Pentatricopeptide repeat-containing protein At3g16010 OS=Arabidopsis thaliana


Gene families : OG0007620 (Archaeplastida) Phylogenetic Tree(s): OG0007620_tree ,
OG_05_0006283 (LandPlants) Phylogenetic Tree(s): OG_05_0006283_tree ,
OG_06_0005058 (SeedPlants) Phylogenetic Tree(s): OG_06_0005058_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00045p00211940
Cluster HCCA: Cluster_67


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005777 peroxisome IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007031 peroxisome organization IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
CC GO:0042579 microbody IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 221 250
IPR002885 Pentatricopeptide_repeat 189 213
IPR002885 Pentatricopeptide_repeat 145 177
IPR002885 Pentatricopeptide_repeat 323 369
IPR002885 Pentatricopeptide_repeat 11 56
IPR002885 Pentatricopeptide_repeat 252 298
IPR002885 Pentatricopeptide_repeat 78 126
No external refs found!