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  5. GSVIVT01036408001

GSVIVT01036408001


Description : External stimuli response.biotic stress.pathogen effector.NLR effector receptor


Gene families : OG0000061 (Archaeplastida) Phylogenetic Tree(s): OG0000061_tree ,
OG_05_0000077 (LandPlants) Phylogenetic Tree(s): OG_05_0000077_tree ,
OG_06_0000151 (SeedPlants) Phylogenetic Tree(s): OG_06_0000151_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01036408001
Cluster HCCA: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00250780 evm_27.TU.AmTr_v1... External stimuli response.biotic stress.pathogen... 0.01 Archaeplastida
AT1G61105 No alias Toll-Interleukin-Resistance (TIR) domain family protein 0.25 Archaeplastida
AT2G20142 No alias Toll-Interleukin-Resistance (TIR) domain family protein 0.01 Archaeplastida
AT3G04220 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.01 Archaeplastida
AT4G11170 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Archaeplastida
AT4G14370 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Archaeplastida
AT5G41550 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.01 Archaeplastida
AT5G41740 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.01 Archaeplastida
GSVIVT01026097001 No alias No description available 0.11 Archaeplastida
Solyc01g102930.1.1 No alias no description available(sp|f4jt78|rpp2a_arath : 145.0) 0.01 Archaeplastida
Solyc12g096880.3.1 No alias effector receptor (NLR) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002182 NB-ARC 209 419
IPR000157 TIR_dom 15 192
No external refs found!