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  5. GSVIVT01036469001

GSVIVT01036469001


Description : Protein trichome birefringence-like 19 OS=Arabidopsis thaliana


Gene families : OG0000288 (Archaeplastida) Phylogenetic Tree(s): OG0000288_tree ,
OG_05_0014107 (LandPlants) Phylogenetic Tree(s): OG_05_0014107_tree ,
OG_06_0015311 (SeedPlants) Phylogenetic Tree(s): OG_06_0015311_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01036469001
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00266030 evm_27.TU.AmTr_v1... Protein trichome birefringence-like 19 OS=Arabidopsis thaliana 0.07 Archaeplastida
AMTR_s00006p00266110 evm_27.TU.AmTr_v1... Protein trichome birefringence-like 19 OS=Arabidopsis thaliana 0.07 Archaeplastida
AMTR_s00006p00266250 evm_27.TU.AmTr_v1... Protein trichome birefringence-like 20 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00025p00185280 evm_27.TU.AmTr_v1... Protein YLS7 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G01430 TBL25 TRICHOME BIREFRINGENCE-LIKE 25 0.05 Archaeplastida
AT1G70230 TBL27 TRICHOME BIREFRINGENCE-LIKE 27 0.06 Archaeplastida
AT4G23790 TBL24 TRICHOME BIREFRINGENCE-LIKE 24 0.07 Archaeplastida
AT5G15890 TBL21 TRICHOME BIREFRINGENCE-LIKE 21 0.02 Archaeplastida
AT5G15900 TBL19 TRICHOME BIREFRINGENCE-LIKE 19 0.05 Archaeplastida
Gb_25866 No alias mannan O-acetyltransferase (MOAT) 0.08 Archaeplastida
Gb_40364 No alias xyloglucan O-acetyltransferase (AXY4). mannan... 0.05 Archaeplastida
LOC_Os01g46400.1 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.07 Archaeplastida
LOC_Os01g46410.1 No alias Protein trichome birefringence-like 21 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os04g39130.1 No alias Protein ALTERED XYLOGLUCAN 4-like OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os06g12820.1 No alias Protein ALTERED XYLOGLUCAN 4-like OS=Arabidopsis... 0.12 Archaeplastida
LOC_Os06g12840.1 No alias Protein ALTERED XYLOGLUCAN 4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os06g16160.1 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os06g16170.1 No alias Protein trichome birefringence-like 20 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os06g16200.1 No alias Protein trichome birefringence-like 20 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os07g15320.1 No alias Protein ALTERED XYLOGLUCAN 4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10427759g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_245850g0010 No alias mannan O-acetyltransferase (MOAT) 0.07 Archaeplastida
Mp8g08270.1 No alias mannan O-acetyltransferase (MOAT) 0.02 Archaeplastida
Pp3c16_10090V3.1 No alias TRICHOME BIREFRINGENCE-LIKE 25 0.04 Archaeplastida
Pp3c16_2250V3.1 No alias TRICHOME BIREFRINGENCE-LIKE 25 0.03 Archaeplastida
Pp3c2_37020V3.1 No alias TRICHOME BIREFRINGENCE-LIKE 25 0.02 Archaeplastida
Smo418889 No alias Protein trichome birefringence-like 19 OS=Arabidopsis thaliana 0.05 Archaeplastida
Solyc01g008050.4.1 No alias xyloglucan O-acetyltransferase (AXY4) 0.03 Archaeplastida
Solyc01g095610.4.1 No alias Protein trichome birefringence-like 25 OS=Arabidopsis... 0.04 Archaeplastida
Solyc02g065600.3.1 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.04 Archaeplastida
Solyc02g087120.4.1 No alias Protein ALTERED XYLOGLUCAN 4-like OS=Arabidopsis... 0.04 Archaeplastida
Solyc02g089700.4.1 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.1 Archaeplastida
Solyc02g089710.3.1 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.03 Archaeplastida
Solyc03g046270.4.1 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.05 Archaeplastida
Solyc08g082060.3.1 No alias mannan O-acetyltransferase (MOAT) 0.03 Archaeplastida
Zm00001e004741_P002 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.06 Archaeplastida
Zm00001e020298_P002 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e020949_P001 No alias Protein ALTERED XYLOGLUCAN 4 OS=Arabidopsis thaliana... 0.11 Archaeplastida
Zm00001e030880_P002 No alias Protein ALTERED XYLOGLUCAN 4-like OS=Arabidopsis... 0.05 Archaeplastida
Zm00001e030881_P001 No alias Protein ALTERED XYLOGLUCAN 4 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e030883_P001 No alias Protein ALTERED XYLOGLUCAN 4 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e036072_P001 No alias Protein ALTERED XYLOGLUCAN 4 OS=Arabidopsis thaliana... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016049 cell growth IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0040007 growth IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR026057 PC-Esterase 97 379
IPR026057 PC-Esterase 495 784
IPR025846 PMR5_N_dom 43 96
IPR025846 PMR5_N_dom 441 494
No external refs found!