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  5. GSVIVT01036538001

GSVIVT01036538001


Description : Phytohormones.auxin.transport.polar auxin transport.BIG regulator protein


Gene families : OG0001460 (Archaeplastida) Phylogenetic Tree(s): OG0001460_tree ,
OG_05_0004241 (LandPlants) Phylogenetic Tree(s): OG_05_0004241_tree ,
OG_06_0005517 (SeedPlants) Phylogenetic Tree(s): OG_06_0005517_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01036538001
Cluster HCCA: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00248360 evm_27.TU.AmTr_v1... Phytohormones.auxin.transport.polar auxin transport.BIG... 0.12 Archaeplastida
AMTR_s00090p00114080 evm_27.TU.AmTr_v1... Phytohormones.auxin.transport.polar auxin transport.BIG... 0.07 Archaeplastida
AT3G02260 DOC1, ASA1,... auxin transport protein (BIG) 0.17 Archaeplastida
Cpa|evm.model.tig00000158.22 No alias Auxin transport protein BIG OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_03145 No alias BIG auxin transport regulator protein 0.05 Archaeplastida
LOC_Os09g07300.1 No alias BIG auxin transport regulator protein 0.08 Archaeplastida
MA_10425891g0010 No alias BIG auxin transport regulator protein 0.15 Archaeplastida
MA_10436857g0010 No alias Auxin transport protein BIG OS=Arabidopsis thaliana... 0.09 Archaeplastida
MA_10437010g0010 No alias No annotation 0.07 Archaeplastida
MA_10437010g0030 No alias Auxin transport protein BIG OS=Oryza sativa subsp.... 0.06 Archaeplastida
MA_141071g0010 No alias Auxin transport protein BIG OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_14729g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_18467g0010 No alias Auxin transport protein BIG OS=Oryza sativa subsp.... 0.08 Archaeplastida
MA_92502g0010 No alias Rac-like GTP-binding protein 7 OS=Oryza sativa subsp.... 0.06 Archaeplastida
Mp2g04600.1 No alias BIG auxin transport regulator protein 0.07 Archaeplastida
Pp3c11_22340V3.1 No alias auxin transport protein (BIG) 0.05 Archaeplastida
Pp3c7_7030V3.1 No alias auxin transport protein (BIG) 0.03 Archaeplastida
Smo141341 No alias Phytohormones.auxin.transport.polar auxin transport.BIG... 0.06 Archaeplastida
Solyc02g089260.4.1 No alias BIG auxin transport regulator protein 0.11 Archaeplastida
Zm00001e033628_P002 No alias BIG auxin transport regulator protein 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000433 Znf_ZZ 2437 2469
IPR025704 E3_Ub_ligase_UBR4 3621 4371
No external refs found!