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  5. AMTR_s00045p00222230

AMTR_s00045p00222230 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00045.312

Description : RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.ADA3 component


Gene families : OG0002472 (Archaeplastida) Phylogenetic Tree(s): OG0002472_tree ,
OG_05_0001862 (LandPlants) Phylogenetic Tree(s): OG_05_0001862_tree ,
OG_06_0002456 (SeedPlants) Phylogenetic Tree(s): OG_06_0002456_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00045p00222230
Cluster HCCA: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
Solyc07g040980.3.1 No alias component ADA3 of SAGA transcription co-activator complex 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP Neighborhood
MF GO:0003910 DNA ligase (ATP) activity IEP Neighborhood
MF GO:0004143 diacylglycerol kinase activity IEP Neighborhood
MF GO:0004177 aminopeptidase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
BP GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Neighborhood
MF GO:0030145 manganese ion binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR019340 Histone_AcTrfase_su3 933 1041
No external refs found!