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  5. GSVIVT01036668001

GSVIVT01036668001


Description : RNA biosynthesis.transcriptional activation.Trihelix transcription factor


Gene families : OG0000562 (Archaeplastida) Phylogenetic Tree(s): OG0000562_tree ,
OG_05_0000321 (LandPlants) Phylogenetic Tree(s): OG_05_0000321_tree ,
OG_06_0005230 (SeedPlants) Phylogenetic Tree(s): OG_06_0005230_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01036668001
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00163540 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.Trihelix... 0.03 Archaeplastida
AT3G54390 No alias sequence-specific DNA binding transcription factors 0.04 Archaeplastida
Gb_02173 No alias transcription factor (Trihelix) 0.03 Archaeplastida
MA_49315g0010 No alias transcription factor (Trihelix) 0.03 Archaeplastida
Solyc01g096470.3.1 No alias transcription factor (Trihelix) 0.04 Archaeplastida
Solyc07g055100.4.1 No alias transcription factor (Trihelix) 0.04 Archaeplastida
Zm00001e028191_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e034887_P001 No alias transcription factor (Trihelix) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016854 racemase and epimerase activity IEP Neighborhood
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Neighborhood
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!