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  5. AMTR_s00045p00225160

AMTR_s00045p00225160 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00045.318

No description available


Gene families : OG0000065 (Archaeplastida) Phylogenetic Tree(s): OG0000065_tree ,
OG_05_0000256 (LandPlants) Phylogenetic Tree(s): OG_05_0000256_tree ,
OG_06_0002535 (SeedPlants) Phylogenetic Tree(s): OG_06_0002535_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00045p00225160
Cluster HCCA: Cluster_210

Target Alias Description ECC score Gene Family Method Actions
AT2G47710 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.03 Archaeplastida
Cre16.g649650 No alias No description available 0.03 Archaeplastida
GSVIVT01031226001 No alias No description available 0.03 Archaeplastida
GSVIVT01031228001 No alias No description available 0.03 Archaeplastida
Gb_32428 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g52314.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os05g06500.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10431018g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_188861g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp6g16930.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc01g059930.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc01g066810.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g084540.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006950 response to stress IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
BP GO:0009439 cyanate metabolic process IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016881 acid-amino acid ligase activity IEP Neighborhood
BP GO:0030029 actin filament-based process IEP Neighborhood
BP GO:0030036 actin cytoskeleton organization IEP Neighborhood
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR006016 UspA 11 157
No external refs found!