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  5. GSVIVT01036703001

GSVIVT01036703001


Description : Protein FORGETTER 1 OS=Arabidopsis thaliana


Gene families : OG0002402 (Archaeplastida) Phylogenetic Tree(s): OG0002402_tree ,
OG_05_0003093 (LandPlants) Phylogenetic Tree(s): OG_05_0003093_tree ,
OG_06_0004398 (SeedPlants) Phylogenetic Tree(s): OG_06_0004398_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01036703001
Cluster HCCA: Cluster_222

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00037p00121600 evm_27.TU.AmTr_v1... Protein FORGETTER 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G79350 EMB1135 RING/FYVE/PHD zinc finger superfamily protein 0.05 Archaeplastida
Cre01.g053250 No alias Protein FORGETTER 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Cre02.g095045 No alias Protein FORGETTER 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Cre13.g578501 No alias Protein FORGETTER 1 OS=Arabidopsis thaliana 0.01 Archaeplastida
Gb_10954 No alias Protein FORGETTER 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_10957 No alias Protein FORGETTER 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os04g52020.1 No alias Protein FORGETTER 1 OS=Arabidopsis thaliana... 0.09 Archaeplastida
LOC_Os04g52030.1 No alias Protein FORGETTER 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os08g12680.1 No alias Protein FORGETTER 1 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Mp1g14790.1 No alias Protein FORGETTER 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c3_5410V3.1 No alias RING/FYVE/PHD zinc finger superfamily protein 0.05 Archaeplastida
Solyc10g005490.4.1 No alias Protein FORGETTER 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e041616_P001 No alias Protein FORGETTER 1 OS=Arabidopsis thaliana... 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003689 DNA clamp loader activity IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003909 DNA ligase activity IEP Neighborhood
MF GO:0003910 DNA ligase (ATP) activity IEP Neighborhood
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005663 DNA replication factor C complex IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007062 sister chromatid cohesion IEP Neighborhood
BP GO:0007064 mitotic sister chromatid cohesion IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Neighborhood
MF GO:0033170 protein-DNA loading ATPase activity IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood
InterPro domains Description Start Stop
IPR026937 SBNO_Helicase_C_dom 784 1073
IPR039187 SNO_AAA 182 515
IPR019787 Znf_PHD-finger 695 743
No external refs found!