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  5. GSVIVT01036717001

GSVIVT01036717001


Description : RNA biosynthesis.transcriptional activation.MYB superfamily.G2-like GARP transcription factor


Gene families : OG0000027 (Archaeplastida) Phylogenetic Tree(s): OG0000027_tree ,
OG_05_0000069 (LandPlants) Phylogenetic Tree(s): OG_05_0000069_tree ,
OG_06_0000042 (SeedPlants) Phylogenetic Tree(s): OG_06_0000042_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01036717001
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00013790 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00022p00190540 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00094p00028710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
AMTR_s00119p00095480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
AT1G69580 No alias Homeodomain-like superfamily protein 0.05 Archaeplastida
AT1G79430 APL, WDY Homeodomain-like superfamily protein 0.1 Archaeplastida
AT2G06020 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
AT3G04030 No alias Homeodomain-like superfamily protein 0.09 Archaeplastida
AT3G12730 No alias Homeodomain-like superfamily protein 0.14 Archaeplastida
GSVIVT01005342001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01025502001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01032776001 No alias Putative Myb family transcription factor At1g14600... 0.02 Archaeplastida
Gb_05469 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Gb_13931 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Gb_36677 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os02g07770.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
LOC_Os03g20900.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
LOC_Os06g45410.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
LOC_Os07g48596.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os08g33750.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
MA_181986g0010 No alias G2-like GARP transcription factor 0.05 Archaeplastida
MA_201937g0020 No alias Myb-related protein 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_21538g0020 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Pp3c10_13030V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Pp3c13_9170V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Pp3c26_3290V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Pp3c3_10940V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Pp3c7_20870V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Smo405704 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
Smo423935 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Solyc05g007890.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc07g045000.4.1 No alias Putative Myb family transcription factor At1g14600... 0.03 Archaeplastida
Solyc09g091880.4.1 No alias G2-like GARP transcription factor. transcription factor (PHR1) 0.03 Archaeplastida
Solyc10g076460.2.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Solyc10g083340.3.1 No alias G2-like GARP transcription factor 0.05 Archaeplastida
Solyc10g085620.2.1 No alias G2-like GARP transcription factor 0.06 Archaeplastida
Solyc12g017370.3.1 No alias G2-like GARP transcription factor 0.08 Archaeplastida
Zm00001e001526_P001 No alias G2-like GARP transcription factor 0.05 Archaeplastida
Zm00001e004125_P001 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Zm00001e009294_P001 No alias Putative Myb family transcription factor At1g14600... 0.03 Archaeplastida
Zm00001e013758_P003 No alias G2-like GARP transcription factor 0.06 Archaeplastida
Zm00001e015514_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e018018_P002 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Zm00001e035893_P001 No alias G2-like GARP transcription factor 0.05 Archaeplastida
Zm00001e037731_P001 No alias G2-like GARP transcription factor 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004143 diacylglycerol kinase activity IEP Neighborhood
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Neighborhood
MF GO:0004620 phospholipase activity IEP Neighborhood
MF GO:0004629 phospholipase C activity IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway IEP Neighborhood
MF GO:0008081 phosphoric diester hydrolase activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
MF GO:0016157 sucrose synthase activity IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 35 83
IPR025756 Myb_CC_LHEQLE 124 164
No external refs found!