GSVIVT01036736001


Description : Prohibitin-1, mitochondrial OS=Arabidopsis thaliana


Gene families : OG0000812 (Archaeplastida) Phylogenetic Tree(s): OG0000812_tree ,
OG_05_0002531 (LandPlants) Phylogenetic Tree(s): OG_05_0002531_tree ,
OG_06_0002970 (SeedPlants) Phylogenetic Tree(s): OG_06_0002970_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01036736001
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00112040 evm_27.TU.AmTr_v1... Prohibitin-1, mitochondrial OS=Arabidopsis thaliana 0.06 Archaeplastida
AT4G28510 PHB1, ATPHB1 prohibitin 1 0.02 Archaeplastida
Cre02.g088000 No alias Prohibitin-1, mitochondrial OS=Arabidopsis thaliana 0.02 Archaeplastida
Cre12.g519350 No alias Protein degradation.peptidase families.metallopeptidase... 0.02 Archaeplastida
Gb_24064 No alias Prohibitin-1, mitochondrial OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os07g15880.1 No alias Prohibitin-2, mitochondrial OS=Arabidopsis thaliana... 0.08 Archaeplastida
MA_18599g0010 No alias prohibitin component of FtsH3/10 matrix-AAA protease heterodimers 0.04 Archaeplastida
MA_461651g0010 No alias Prohibitin-6, mitochondrial OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_9438062g0010 No alias Prohibitin-1, mitochondrial OS=Arabidopsis thaliana... 0.06 Archaeplastida
Pp3c5_6150V3.1 No alias prohibitin 2 0.03 Archaeplastida
Pp3c6_17690V3.1 No alias prohibitin 2 0.03 Archaeplastida
Solyc10g008140.3.1 No alias Prohibitin-2, mitochondrial OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc11g013260.3.1 No alias prohibitin component of FtsH3/10 matrix-AAA protease heterodimers 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004177 aminopeptidase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
MF GO:0030145 manganese ion binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001107 Band_7 72 248
No external refs found!