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  5. GSVIVT01036862001

GSVIVT01036862001


Description : Probable carotenoid cleavage dioxygenase 4, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0000267 (Archaeplastida) Phylogenetic Tree(s): OG0000267_tree ,
OG_05_0115107 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0093380 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01036862001
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00255760 evm_27.TU.AmTr_v1... Secondary metabolism.terpenoids.terpenoid... 0.04 Archaeplastida
AT3G24220 NCED6, ATNCED6 nine-cis-epoxycarotenoid dioxygenase 6 0.04 Archaeplastida
Cre03.g149650 No alias Carotenoid 9,10(9,10)-cleavage dioxygenase 1... 0.02 Archaeplastida
MA_90573g0010 No alias carotenoid cleavage dioxygenase (CCD4) 0.03 Archaeplastida
Mp2g07800.1 No alias carotenoid cleavage dioxygenase (CCD4). neoxanthin... 0.03 Archaeplastida
Pp3c12_22350V3.1 No alias carotenoid cleavage dioxygenase 1 0.04 Archaeplastida
Pp3c21_12920V3.1 No alias carotenoid cleavage dioxygenase 1 0.02 Archaeplastida
Pp3c22_6380V3.1 No alias carotenoid cleavage dioxygenase 1 0.02 Archaeplastida
Solyc05g053530.1.1 No alias neoxanthin cleavage protein 0.03 Archaeplastida
Solyc08g075480.4.1 No alias carotenoid cleavage dioxygenase (CCD4) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 148 373
IPR004294 Carotenoid_Oase 376 437
IPR004294 Carotenoid_Oase 596 678
IPR004294 Carotenoid_Oase 683 775
IPR004294 Carotenoid_Oase 786 901
No external refs found!