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  5. AMTR_s00045p00228140

AMTR_s00045p00228140 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00045.330

Description : Chaperone protein dnaJ 49 OS=Arabidopsis thaliana


Gene families : OG0002380 (Archaeplastida) Phylogenetic Tree(s): OG0002380_tree ,
OG_05_0002766 (LandPlants) Phylogenetic Tree(s): OG_05_0002766_tree ,
OG_06_0002522 (SeedPlants) Phylogenetic Tree(s): OG_06_0002522_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00045p00228140
Cluster HCCA: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
AT3G57340 No alias Heat shock protein DnaJ, N-terminal with domain of... 0.02 Archaeplastida
Pp3c7_20040V3.1 No alias Heat shock protein DnaJ, N-terminal with domain of... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Neighborhood
CC GO:0000172 ribonuclease MRP complex IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
CC GO:0005732 small nucleolar ribonucleoprotein complex IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006379 mRNA cleavage IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
CC GO:0030677 ribonuclease P complex IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP Neighborhood
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901567 fatty acid derivative binding IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
CC GO:1902555 endoribonuclease complex IEP Neighborhood
CC GO:1905348 endonuclease complex IEP Neighborhood
InterPro domains Description Start Stop
IPR015399 DUF1977_DnaJ-like 340 432
IPR001623 DnaJ_domain 189 250
No external refs found!